Protein–RNA interactions for Protein: Q8WXD2

SCG3, Secretogranin-3, humanhuman

Known RBP Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3Q8WXD2 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC14.42□□□□□ -0.1
SCG3Q8WXD2 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SCG3Q8WXD2 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC14.42□□□□□ -0.1
SCG3Q8WXD2 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC14.42□□□□□ -0.1
SCG3Q8WXD2 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SCG3Q8WXD2 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SCG3Q8WXD2 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SCG3Q8WXD2 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SCG3Q8WXD2 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SCG3Q8WXD2 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SCG3Q8WXD2 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC14.42□□□□□ -0.1
SCG3Q8WXD2 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SCG3Q8WXD2 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SCG3Q8WXD2 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SCG3Q8WXD2 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SCG3Q8WXD2 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SCG3Q8WXD2 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC14.42□□□□□ -0.1
SCG3Q8WXD2 IMP3P2-201ENST00000489760 475 ntBASIC14.42□□□□□ -0.1
SCG3Q8WXD2 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SCG3Q8WXD2 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC14.42□□□□□ -0.1
SCG3Q8WXD2 NUP210P1-202ENST00000504322 710 ntBASIC14.42□□□□□ -0.1
SCG3Q8WXD2 POU5F1P2-201ENST00000521750 823 ntBASIC14.42□□□□□ -0.1
SCG3Q8WXD2 FADS2-212ENST00000522639 360 ntTSL 5 BASIC14.42□□□□□ -0.1
SCG3Q8WXD2 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
SCG3Q8WXD2 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC14.42□□□□□ -0.1
SCG3Q8WXD2 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SCG3Q8WXD2 CHMP4BP1-201ENST00000556017 588 ntBASIC14.42□□□□□ -0.1
SCG3Q8WXD2 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC14.42□□□□□ -0.1
SCG3Q8WXD2 FADS2-215ENST00000574708 385 ntTSL 3 BASIC14.42□□□□□ -0.1
SCG3Q8WXD2 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC14.42□□□□□ -0.1
SCG3Q8WXD2 AC005962.1-201ENST00000584100 773 ntBASIC14.42□□□□□ -0.1
SCG3Q8WXD2 CENPX-208ENST00000584347 799 ntTSL 2 BASIC14.42□□□□□ -0.1
SCG3Q8WXD2 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC14.42□□□□□ -0.1
SCG3Q8WXD2 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
SCG3Q8WXD2 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SCG3Q8WXD2 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SCG3Q8WXD2 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SCG3Q8WXD2 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SCG3Q8WXD2 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SCG3Q8WXD2 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SCG3Q8WXD2 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SCG3Q8WXD2 AL022313.4-201ENST00000562756 2046 ntBASIC14.42□□□□□ -0.1
SCG3Q8WXD2 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
SCG3Q8WXD2 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SCG3Q8WXD2 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SCG3Q8WXD2 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
SCG3Q8WXD2 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
SCG3Q8WXD2 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SCG3Q8WXD2 PLD1-201ENST00000331659 2906 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SCG3Q8WXD2 PCGF2-202ENST00000611883 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SCG3Q8WXD2 TP73-211ENST00000604074 4806 ntTSL 5 BASIC14.41□□□□□ -0.1
SCG3Q8WXD2 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC14.41□□□□□ -0.1
SCG3Q8WXD2 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SCG3Q8WXD2 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SCG3Q8WXD2 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
SCG3Q8WXD2 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
SCG3Q8WXD2 NUTM2E-202ENST00000602967 3623 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
SCG3Q8WXD2 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
SCG3Q8WXD2 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC14.41□□□□□ -0.1
SCG3Q8WXD2 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC14.41□□□□□ -0.1
SCG3Q8WXD2 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SCG3Q8WXD2 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC14.41□□□□□ -0.1
SCG3Q8WXD2 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SCG3Q8WXD2 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SCG3Q8WXD2 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SCG3Q8WXD2 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC14.41□□□□□ -0.1
SCG3Q8WXD2 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SCG3Q8WXD2 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SCG3Q8WXD2 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
SCG3Q8WXD2 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SCG3Q8WXD2 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
SCG3Q8WXD2 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC14.41□□□□□ -0.1
SCG3Q8WXD2 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC14.41□□□□□ -0.1
SCG3Q8WXD2 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC14.41□□□□□ -0.1
SCG3Q8WXD2 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC14.41□□□□□ -0.1
SCG3Q8WXD2 FGFR3P5-201ENST00000564496 886 ntBASIC14.41□□□□□ -0.1
SCG3Q8WXD2 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC14.41□□□□□ -0.1
SCG3Q8WXD2 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC14.41□□□□□ -0.1
SCG3Q8WXD2 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC14.41□□□□□ -0.1
SCG3Q8WXD2 AC090386.2-201ENST00000623010 1039 ntBASIC14.41□□□□□ -0.1
SCG3Q8WXD2 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
SCG3Q8WXD2 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SCG3Q8WXD2 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SCG3Q8WXD2 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
SCG3Q8WXD2 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC14.41□□□□□ -0.1
SCG3Q8WXD2 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
SCG3Q8WXD2 TMEM131L-202ENST00000409663 5017 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
SCG3Q8WXD2 MEX3B-202ENST00000558133 4333 ntBASIC14.41□□□□□ -0.1
SCG3Q8WXD2 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SCG3Q8WXD2 SLC45A1-201ENST00000289877 2401 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SCG3Q8WXD2 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC14.41□□□□□ -0.1
SCG3Q8WXD2 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
SCG3Q8WXD2 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SCG3Q8WXD2 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
SCG3Q8WXD2 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SCG3Q8WXD2 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SCG3Q8WXD2 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC14.4□□□□□ -0.1
SCG3Q8WXD2 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC14.4□□□□□ -0.1
SCG3Q8WXD2 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC14.4□□□□□ -0.1
SCG3Q8WXD2 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms