Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SNED1Q8TER0 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
SNED1Q8TER0 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
SNED1Q8TER0 ADCK1-201ENST00000238561 2234 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SNED1Q8TER0 DLX4-206ENST00000611342 1662 ntBASIC16.51■□□□□ 0.23
SNED1Q8TER0 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SNED1Q8TER0 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SNED1Q8TER0 NANOS3-201ENST00000339133 581 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SNED1Q8TER0 PMF1-201ENST00000368273 884 ntTSL 2 BASIC16.51■□□□□ 0.23
SNED1Q8TER0 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SNED1Q8TER0 AC090696.1-201ENST00000419100 418 ntTSL 3 BASIC16.51■□□□□ 0.23
SNED1Q8TER0 AL954722.1-201ENST00000431238 259 ntBASIC16.51■□□□□ 0.23
SNED1Q8TER0 AC078882.1-201ENST00000436132 416 ntTSL 2 BASIC16.51■□□□□ 0.23
SNED1Q8TER0 AC108879.1-201ENST00000438026 828 ntTSL 3 BASIC16.51■□□□□ 0.23
SNED1Q8TER0 AL161727.1-201ENST00000457409 530 ntBASIC16.51■□□□□ 0.23
SNED1Q8TER0 ARHGEF26-AS1-203ENST00000480639 582 ntTSL 2 BASIC16.51■□□□□ 0.23
SNED1Q8TER0 RN7SL646P-201ENST00000492969 297 ntBASIC16.51■□□□□ 0.23
SNED1Q8TER0 AC090200.1-201ENST00000522918 590 ntTSL 2 BASIC16.51■□□□□ 0.23
SNED1Q8TER0 LINC00643-202ENST00000553426 526 ntTSL 3 BASIC16.51■□□□□ 0.23
SNED1Q8TER0 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC16.51■□□□□ 0.23
SNED1Q8TER0 GMFG-206ENST00000597595 758 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SNED1Q8TER0 GTF3A-209ENST00000640289 1098 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SNED1Q8TER0 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
SNED1Q8TER0 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SNED1Q8TER0 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
SNED1Q8TER0 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SNED1Q8TER0 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SNED1Q8TER0 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SNED1Q8TER0 AAR2-203ENST00000397286 1466 ntTSL 5 BASIC16.5■□□□□ 0.23
SNED1Q8TER0 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
SNED1Q8TER0 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
SNED1Q8TER0 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
SNED1Q8TER0 AL157996.1-201ENST00000624684 2299 ntBASIC16.5■□□□□ 0.23
SNED1Q8TER0 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SNED1Q8TER0 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SNED1Q8TER0 FAHD2A-204ENST00000447036 1366 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
SNED1Q8TER0 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SNED1Q8TER0 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SNED1Q8TER0 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SNED1Q8TER0 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC16.5■□□□□ 0.23
SNED1Q8TER0 CYP2B6-202ENST00000593831 1426 ntTSL 2 BASIC16.5■□□□□ 0.23
SNED1Q8TER0 AC005089.1-201ENST00000619486 2241 ntBASIC16.5■□□□□ 0.23
SNED1Q8TER0 LXN-201ENST00000264265 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SNED1Q8TER0 AC105443.1-201ENST00000433754 712 ntBASIC16.5■□□□□ 0.23
SNED1Q8TER0 TULP3P1-202ENST00000453253 1291 ntBASIC16.5■□□□□ 0.23
SNED1Q8TER0 RN7SL838P-201ENST00000481676 295 ntBASIC16.5■□□□□ 0.23
SNED1Q8TER0 BCL2L2-PABPN1-201ENST00000553781 1241 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
SNED1Q8TER0 AC007223.1-201ENST00000564076 572 ntTSL 3 BASIC16.5■□□□□ 0.23
SNED1Q8TER0 AC142381.4-201ENST00000566806 702 ntTSL 3 BASIC16.5■□□□□ 0.23
SNED1Q8TER0 AC142086.5-201ENST00000567619 702 ntTSL 5 BASIC16.5■□□□□ 0.23
SNED1Q8TER0 AC011483.3-201ENST00000601506 826 ntTSL 3 BASIC16.5■□□□□ 0.23
SNED1Q8TER0 URGCP-MRPS24-201ENST00000603700 795 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
SNED1Q8TER0 AC009812.1-201ENST00000605948 1059 ntBASIC16.5■□□□□ 0.23
SNED1Q8TER0 Metazoa_SRP.122-201ENST00000610476 285 ntBASIC16.5■□□□□ 0.23
SNED1Q8TER0 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SNED1Q8TER0 HAO1-201ENST00000378789 1777 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SNED1Q8TER0 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SNED1Q8TER0 CNBP-207ENST00000502976 1626 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SNED1Q8TER0 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SNED1Q8TER0 APEX1-201ENST00000216714 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SNED1Q8TER0 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SNED1Q8TER0 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
SNED1Q8TER0 AC002350.2-201ENST00000623894 1828 ntBASIC16.5■□□□□ 0.23
SNED1Q8TER0 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SNED1Q8TER0 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SNED1Q8TER0 FAM153C-201ENST00000398106 1510 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
SNED1Q8TER0 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC16.49■□□□□ 0.23
SNED1Q8TER0 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SNED1Q8TER0 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SNED1Q8TER0 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SNED1Q8TER0 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
SNED1Q8TER0 CCER1-201ENST00000358859 2962 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
SNED1Q8TER0 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SNED1Q8TER0 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
SNED1Q8TER0 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SNED1Q8TER0 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SNED1Q8TER0 DRD3-202ENST00000383673 1640 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
SNED1Q8TER0 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SNED1Q8TER0 FAM178B-201ENST00000393526 1004 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
SNED1Q8TER0 CRYZL1-205ENST00000399442 612 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SNED1Q8TER0 IGSF23-201ENST00000402988 989 ntAPPRIS P2 TSL 3 BASIC16.49■□□□□ 0.23
SNED1Q8TER0 CA5BP1-205ENST00000435806 1064 ntBASIC16.49■□□□□ 0.23
SNED1Q8TER0 PDLIM2-212ENST00000443561 701 ntTSL 2 BASIC16.49■□□□□ 0.23
SNED1Q8TER0 TGFA-206ENST00000445399 812 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SNED1Q8TER0 RN7SL789P-201ENST00000478944 293 ntBASIC16.49■□□□□ 0.23
SNED1Q8TER0 ALDOAP1-201ENST00000491506 1078 ntBASIC16.49■□□□□ 0.23
SNED1Q8TER0 CHTF8-207ENST00000520529 475 ntTSL 2 BASIC16.49■□□□□ 0.23
SNED1Q8TER0 TBX5-AS1-202ENST00000531024 766 ntTSL 3 BASIC16.49■□□□□ 0.23
SNED1Q8TER0 DDX11L8-201ENST00000535849 366 ntBASIC16.49■□□□□ 0.23
SNED1Q8TER0 LINC00677-201ENST00000558224 486 ntTSL 3 BASIC16.49■□□□□ 0.23
SNED1Q8TER0 MT1X-202ENST00000562939 538 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SNED1Q8TER0 AC026461.1-201ENST00000567563 551 ntTSL 4 BASIC16.49■□□□□ 0.23
SNED1Q8TER0 RN7SL300P-201ENST00000582522 318 ntBASIC16.49■□□□□ 0.23
SNED1Q8TER0 AC008993.3-201ENST00000633603 631 ntTSL 5 BASIC16.49■□□□□ 0.23
SNED1Q8TER0 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
SNED1Q8TER0 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
SNED1Q8TER0 LINC02486-201ENST00000604157 3000 ntBASIC16.49■□□□□ 0.23
SNED1Q8TER0 AC026271.1-201ENST00000447794 1348 ntBASIC16.49■□□□□ 0.23
SNED1Q8TER0 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
SNED1Q8TER0 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms