Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 AC116903.2-201ENST00000561674 1304 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
COL22A1Q8NFW1 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
COL22A1Q8NFW1 CICP16-201ENST00000502609 2813 ntBASIC17.68■□□□□ 0.42
COL22A1Q8NFW1 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC17.68■□□□□ 0.42
COL22A1Q8NFW1 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
COL22A1Q8NFW1 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
COL22A1Q8NFW1 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
COL22A1Q8NFW1 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
COL22A1Q8NFW1 AL391987.4-201ENST00000377547 439 ntTSL 3 BASIC17.68■□□□□ 0.42
COL22A1Q8NFW1 AC145285.1-201ENST00000469929 694 ntBASIC17.68■□□□□ 0.42
COL22A1Q8NFW1 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC17.68■□□□□ 0.42
COL22A1Q8NFW1 AL355075.5-201ENST00000553568 890 ntBASIC17.68■□□□□ 0.42
COL22A1Q8NFW1 SMIM6-202ENST00000579469 957 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
COL22A1Q8NFW1 SMIM11B-202ENST00000619874 843 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
COL22A1Q8NFW1 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
COL22A1Q8NFW1 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
COL22A1Q8NFW1 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
COL22A1Q8NFW1 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC17.68■□□□□ 0.42
COL22A1Q8NFW1 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
COL22A1Q8NFW1 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC17.68■□□□□ 0.42
COL22A1Q8NFW1 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
COL22A1Q8NFW1 UGT3A1-203ENST00000503189 1902 ntTSL 2 BASIC17.67■□□□□ 0.42
COL22A1Q8NFW1 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
COL22A1Q8NFW1 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC17.67■□□□□ 0.42
COL22A1Q8NFW1 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
COL22A1Q8NFW1 MKL1-212ENST00000618417 1842 ntTSL 5 BASIC17.67■□□□□ 0.42
COL22A1Q8NFW1 GMPR2-201ENST00000348719 1684 ntTSL 5 BASIC17.67■□□□□ 0.42
COL22A1Q8NFW1 ATP6V1B1-201ENST00000234396 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
COL22A1Q8NFW1 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
COL22A1Q8NFW1 KIR2DL3-201ENST00000342376 1590 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
COL22A1Q8NFW1 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
COL22A1Q8NFW1 MYL1-202ENST00000352451 1065 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
COL22A1Q8NFW1 APTX-203ENST00000379813 1121 ntTSL 5 BASIC17.67■□□□□ 0.42
COL22A1Q8NFW1 IGHV1-45-201ENST00000390621 411 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
COL22A1Q8NFW1 AC064836.1-201ENST00000405197 704 ntBASIC17.67■□□□□ 0.42
COL22A1Q8NFW1 HNRNPA1P33-201ENST00000421426 561 ntBASIC17.67■□□□□ 0.42
COL22A1Q8NFW1 AC118758.1-201ENST00000448242 564 ntTSL 4 BASIC17.67■□□□□ 0.42
COL22A1Q8NFW1 APTX-220ENST00000476858 1068 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
COL22A1Q8NFW1 HINT1-204ENST00000506908 681 ntTSL 2 BASIC17.67■□□□□ 0.42
COL22A1Q8NFW1 SNHG5-211ENST00000587692 1029 ntTSL 3 BASIC17.67■□□□□ 0.42
COL22A1Q8NFW1 AC104423.1-201ENST00000591742 728 ntTSL 3 BASIC17.67■□□□□ 0.42
COL22A1Q8NFW1 AC106774.4-201ENST00000600799 409 ntBASIC17.67■□□□□ 0.42
COL22A1Q8NFW1 AC018755.1-201ENST00000601315 1182 ntBASIC17.67■□□□□ 0.42
COL22A1Q8NFW1 AP006621.5-202ENST00000623692 636 ntBASIC17.67■□□□□ 0.42
COL22A1Q8NFW1 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC17.67■□□□□ 0.42
COL22A1Q8NFW1 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC17.67■□□□□ 0.42
COL22A1Q8NFW1 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
COL22A1Q8NFW1 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
COL22A1Q8NFW1 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC17.67■□□□□ 0.42
COL22A1Q8NFW1 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
COL22A1Q8NFW1 C1QTNF3-201ENST00000231338 1959 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
COL22A1Q8NFW1 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
COL22A1Q8NFW1 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
COL22A1Q8NFW1 TCAM1P-207ENST00000485295 1537 ntBASIC17.67■□□□□ 0.42
COL22A1Q8NFW1 CNOT7-211ENST00000523917 1885 ntTSL 2 BASIC17.67■□□□□ 0.42
COL22A1Q8NFW1 ARSG-209ENST00000621439 2599 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
COL22A1Q8NFW1 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
COL22A1Q8NFW1 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
COL22A1Q8NFW1 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
COL22A1Q8NFW1 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
COL22A1Q8NFW1 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
COL22A1Q8NFW1 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC17.66■□□□□ 0.42
COL22A1Q8NFW1 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
COL22A1Q8NFW1 CPA5-203ENST00000461828 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
COL22A1Q8NFW1 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
COL22A1Q8NFW1 AL353801.2-201ENST00000436877 1444 ntTSL 5 BASIC17.66■□□□□ 0.42
COL22A1Q8NFW1 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
COL22A1Q8NFW1 ZNF816-201ENST00000270457 582 ntTSL 3 BASIC17.66■□□□□ 0.42
COL22A1Q8NFW1 OR8B8-201ENST00000328064 1033 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
COL22A1Q8NFW1 TPT1-203ENST00000379056 1101 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
COL22A1Q8NFW1 PRSS3-203ENST00000379405 834 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
COL22A1Q8NFW1 AC017081.1-201ENST00000420063 823 ntBASIC17.66■□□□□ 0.42
COL22A1Q8NFW1 PIN1P1-202ENST00000439639 301 ntBASIC17.66■□□□□ 0.42
COL22A1Q8NFW1 AC107959.3-201ENST00000520840 484 ntTSL 5 BASIC17.66■□□□□ 0.42
COL22A1Q8NFW1 CRYAB-213ENST00000533475 1119 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
COL22A1Q8NFW1 EEF1DP8-201ENST00000534760 536 ntBASIC17.66■□□□□ 0.42
COL22A1Q8NFW1 AC069503.1-201ENST00000538710 816 ntTSL 2 BASIC17.66■□□□□ 0.42
COL22A1Q8NFW1 COPZ1-207ENST00000549116 736 ntTSL 2 BASIC17.66■□□□□ 0.42
COL22A1Q8NFW1 DEGS2-202ENST00000553834 421 ntTSL 3 BASIC17.66■□□□□ 0.42
COL22A1Q8NFW1 KRT16P4-202ENST00000580052 362 ntTSL 3 BASIC17.66■□□□□ 0.42
COL22A1Q8NFW1 AD000091.1-201ENST00000592379 287 ntBASIC17.66■□□□□ 0.42
COL22A1Q8NFW1 PDE4C-213ENST00000598111 1284 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
COL22A1Q8NFW1 PDZRN3-AS1-202ENST00000608304 774 ntTSL 5 BASIC17.66■□□□□ 0.42
COL22A1Q8NFW1 Metazoa_SRP.97-201ENST00000618280 304 ntBASIC17.66■□□□□ 0.42
COL22A1Q8NFW1 PHF10-206ENST00000621772 1651 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
COL22A1Q8NFW1 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
COL22A1Q8NFW1 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC17.66■□□□□ 0.42
COL22A1Q8NFW1 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
COL22A1Q8NFW1 FP671120.1-201ENST00000623664 2498 ntTSL 2 BASIC17.66■□□□□ 0.42
COL22A1Q8NFW1 FP236383.1-201ENST00000623860 2498 ntTSL 2 BASIC17.66■□□□□ 0.42
COL22A1Q8NFW1 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
COL22A1Q8NFW1 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
COL22A1Q8NFW1 ASGR2-201ENST00000254850 1396 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
COL22A1Q8NFW1 ASGR2-202ENST00000355035 1386 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
COL22A1Q8NFW1 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
COL22A1Q8NFW1 SLC26A5-211ENST00000432958 2588 ntTSL 5 BASIC17.66■□□□□ 0.42
COL22A1Q8NFW1 UBA2-201ENST00000246548 4023 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
COL22A1Q8NFW1 GPATCH2L-202ENST00000312858 2438 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
COL22A1Q8NFW1 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
COL22A1Q8NFW1 AC009093.1-201ENST00000566070 2099 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms