Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 AC080013.1-204ENST00000607426 2185 ntBASIC13.16□□□□□ -0.3
LPCAT4Q643R3 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LPCAT4Q643R3 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
LPCAT4Q643R3 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LPCAT4Q643R3 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
LPCAT4Q643R3 HNRNPA3P1-201ENST00000401429 1139 ntBASIC13.16□□□□□ -0.3
LPCAT4Q643R3 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC13.16□□□□□ -0.3
LPCAT4Q643R3 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC13.16□□□□□ -0.3
LPCAT4Q643R3 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
LPCAT4Q643R3 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LPCAT4Q643R3 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC13.16□□□□□ -0.3
LPCAT4Q643R3 MYCLP2-201ENST00000449268 967 ntBASIC13.16□□□□□ -0.3
LPCAT4Q643R3 HNRNPA3P5-201ENST00000455201 833 ntBASIC13.16□□□□□ -0.3
LPCAT4Q643R3 AC093433.1-201ENST00000458048 571 ntBASIC13.16□□□□□ -0.3
LPCAT4Q643R3 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC13.16□□□□□ -0.3
LPCAT4Q643R3 FTLP10-202ENST00000505798 471 ntBASIC13.16□□□□□ -0.3
LPCAT4Q643R3 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC13.16□□□□□ -0.3
LPCAT4Q643R3 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC13.16□□□□□ -0.3
LPCAT4Q643R3 AC109322.1-201ENST00000524499 1264 ntBASIC13.16□□□□□ -0.3
LPCAT4Q643R3 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC13.16□□□□□ -0.3
LPCAT4Q643R3 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC13.16□□□□□ -0.3
LPCAT4Q643R3 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LPCAT4Q643R3 SNHG9-202ENST00000564014 471 ntBASIC13.16□□□□□ -0.3
LPCAT4Q643R3 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
LPCAT4Q643R3 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC13.16□□□□□ -0.3
LPCAT4Q643R3 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC13.16□□□□□ -0.3
LPCAT4Q643R3 AC011495.2-201ENST00000600665 360 ntTSL 5 BASIC13.16□□□□□ -0.3
LPCAT4Q643R3 AL390955.2-201ENST00000603032 514 ntBASIC13.16□□□□□ -0.3
LPCAT4Q643R3 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC13.16□□□□□ -0.3
LPCAT4Q643R3 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
LPCAT4Q643R3 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
LPCAT4Q643R3 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC13.16□□□□□ -0.3
LPCAT4Q643R3 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC13.16□□□□□ -0.3
LPCAT4Q643R3 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC13.16□□□□□ -0.3
LPCAT4Q643R3 Z92544.3-201ENST00000624747 417 ntBASIC13.16□□□□□ -0.3
LPCAT4Q643R3 CACNA1G-227ENST00000513964 6735 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
LPCAT4Q643R3 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
LPCAT4Q643R3 URGCP-201ENST00000336086 5658 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
LPCAT4Q643R3 HJURP-204ENST00000432087 3027 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
LPCAT4Q643R3 PHC2-201ENST00000257118 3870 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
LPCAT4Q643R3 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC13.16□□□□□ -0.3
LPCAT4Q643R3 PML-207ENST00000435786 3643 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
LPCAT4Q643R3 EPB42-202ENST00000441366 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LPCAT4Q643R3 SMIM27-203ENST00000451672 2382 ntAPPRIS ALT2 BASIC13.16□□□□□ -0.3
LPCAT4Q643R3 CYP11B1-204ENST00000517471 1874 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LPCAT4Q643R3 SLC6A7-201ENST00000230671 3739 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LPCAT4Q643R3 PLEKHG5-202ENST00000377725 3475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
LPCAT4Q643R3 MKL1-205ENST00000407029 4091 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LPCAT4Q643R3 CSPG4P11-201ENST00000560634 4910 ntBASIC13.16□□□□□ -0.3
LPCAT4Q643R3 EIF4G1-207ENST00000411531 4683 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LPCAT4Q643R3 LAP3P2-201ENST00000454686 1454 ntBASIC13.16□□□□□ -0.3
LPCAT4Q643R3 TCF3-220ENST00000611869 4409 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
LPCAT4Q643R3 SMARCA4-205ENST00000450717 5506 ntTSL 5 BASIC13.16□□□□□ -0.3
LPCAT4Q643R3 TNC-212ENST00000542877 5517 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LPCAT4Q643R3 IGHG2-202ENST00000641095 2594 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
LPCAT4Q643R3 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LPCAT4Q643R3 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC13.15□□□□□ -0.3
LPCAT4Q643R3 PPP1R26P1-201ENST00000474415 3613 ntBASIC13.15□□□□□ -0.3
LPCAT4Q643R3 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC13.15□□□□□ -0.3
LPCAT4Q643R3 AL590824.1-201ENST00000403828 1349 ntBASIC13.15□□□□□ -0.3
LPCAT4Q643R3 AC104590.1-202ENST00000558368 1921 ntBASIC13.15□□□□□ -0.3
LPCAT4Q643R3 MADD-203ENST00000349238 5873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
LPCAT4Q643R3 MTERF2-207ENST00000552029 3235 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LPCAT4Q643R3 ATG7-213ENST00000446450 2042 ntTSL 2 BASIC13.15□□□□□ -0.3
LPCAT4Q643R3 CICP19-201ENST00000632944 2357 ntBASIC13.15□□□□□ -0.3
LPCAT4Q643R3 ALOXE3-201ENST00000318227 3053 ntTSL 2 BASIC13.15□□□□□ -0.3
LPCAT4Q643R3 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LPCAT4Q643R3 TECTA-201ENST00000264037 6468 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LPCAT4Q643R3 PRAMEF25-201ENST00000614839 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LPCAT4Q643R3 PRAMEF26-201ENST00000624207 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LPCAT4Q643R3 MDGA1-207ENST00000505425 3021 ntTSL 5 BASIC13.15□□□□□ -0.3
LPCAT4Q643R3 ELMOD3-202ENST00000393852 2332 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LPCAT4Q643R3 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LPCAT4Q643R3 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC13.15□□□□□ -0.3
LPCAT4Q643R3 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
LPCAT4Q643R3 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
LPCAT4Q643R3 TUBB2BP1-201ENST00000404155 871 ntBASIC13.15□□□□□ -0.3
LPCAT4Q643R3 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC13.15□□□□□ -0.3
LPCAT4Q643R3 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC13.15□□□□□ -0.3
LPCAT4Q643R3 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC13.15□□□□□ -0.3
LPCAT4Q643R3 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LPCAT4Q643R3 CICP12-201ENST00000455801 843 ntBASIC13.15□□□□□ -0.3
LPCAT4Q643R3 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC13.15□□□□□ -0.3
LPCAT4Q643R3 AC124283.3-201ENST00000570869 594 ntBASIC13.15□□□□□ -0.3
LPCAT4Q643R3 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC13.15□□□□□ -0.3
LPCAT4Q643R3 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC13.15□□□□□ -0.3
LPCAT4Q643R3 POLL-203ENST00000370162 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LPCAT4Q643R3 TMEM86A-201ENST00000280734 3595 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LPCAT4Q643R3 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC13.15□□□□□ -0.3
LPCAT4Q643R3 TMEM78-201ENST00000323223 2175 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
LPCAT4Q643R3 TXLNA-201ENST00000373609 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LPCAT4Q643R3 RNF43-208ENST00000584437 5575 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LPCAT4Q643R3 SELPLG-203ENST00000550948 2256 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
LPCAT4Q643R3 TSPEAR-203ENST00000613245 3524 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LPCAT4Q643R3 DHX16-201ENST00000376437 1933 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LPCAT4Q643R3 AL357054.4-201ENST00000606285 2814 ntBASIC13.15□□□□□ -0.3
LPCAT4Q643R3 KRT78-202ENST00000359499 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
LPCAT4Q643R3 UBTFL8-201ENST00000426903 2112 ntBASIC13.15□□□□□ -0.3
LPCAT4Q643R3 DHX30-206ENST00000446256 3660 ntAPPRIS P2 TSL 2 BASIC13.15□□□□□ -0.31
LPCAT4Q643R3 PHLDB1-201ENST00000356063 5240 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms