Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
VPS13DQ5THJ4 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
VPS13DQ5THJ4 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
VPS13DQ5THJ4 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC8.92□□□□□ -0.98
VPS13DQ5THJ4 S100A7A-202ENST00000368728 440 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
VPS13DQ5THJ4 HIST1H2BN-201ENST00000396980 432 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
VPS13DQ5THJ4 AC131235.2-201ENST00000445553 1057 ntBASIC8.92□□□□□ -0.98
VPS13DQ5THJ4 AC234582.2-201ENST00000455788 568 ntTSL 3 BASIC8.92□□□□□ -0.98
VPS13DQ5THJ4 DDIAS-204ENST00000525388 961 ntAPPRIS ALT2 TSL 2 BASIC8.92□□□□□ -0.98
VPS13DQ5THJ4 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC8.92□□□□□ -0.98
VPS13DQ5THJ4 MPI-208ENST00000563786 1707 ntTSL 5 BASIC8.92□□□□□ -0.98
VPS13DQ5THJ4 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
VPS13DQ5THJ4 TLN2-202ENST00000472902 2116 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
VPS13DQ5THJ4 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
VPS13DQ5THJ4 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
VPS13DQ5THJ4 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC8.92□□□□□ -0.98
VPS13DQ5THJ4 RBP1-201ENST00000232219 898 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
VPS13DQ5THJ4 CHCHD1-202ENST00000372837 1202 ntTSL 2 BASIC8.92□□□□□ -0.98
VPS13DQ5THJ4 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
VPS13DQ5THJ4 Metazoa_SRP.8-201ENST00000398067 251 ntBASIC8.92□□□□□ -0.98
VPS13DQ5THJ4 GSG1L2-201ENST00000399363 882 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
VPS13DQ5THJ4 LINC02154-201ENST00000412485 1497 ntTSL 2 BASIC8.92□□□□□ -0.98
VPS13DQ5THJ4 ATP5G1P7-201ENST00000444398 400 ntBASIC8.92□□□□□ -0.98
VPS13DQ5THJ4 TUBB8P5-201ENST00000445286 1351 ntBASIC8.92□□□□□ -0.98
VPS13DQ5THJ4 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC8.92□□□□□ -0.98
VPS13DQ5THJ4 AC005840.4-201ENST00000541242 2494 ntBASIC8.92□□□□□ -0.98
VPS13DQ5THJ4 MYL6-210ENST00000548400 573 ntTSL 3 BASIC8.92□□□□□ -0.98
VPS13DQ5THJ4 AC009093.2-201ENST00000563477 546 ntTSL 4 BASIC8.92□□□□□ -0.98
VPS13DQ5THJ4 RAB8A-202ENST00000586682 1315 ntTSL 2 BASIC8.92□□□□□ -0.98
VPS13DQ5THJ4 RBP1-206ENST00000617459 667 ntTSL 2 BASIC8.92□□□□□ -0.98
VPS13DQ5THJ4 AC148476.1-201ENST00000622182 705 ntBASIC8.92□□□□□ -0.98
VPS13DQ5THJ4 AC099552.4-201ENST00000624248 949 ntBASIC8.92□□□□□ -0.98
VPS13DQ5THJ4 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
VPS13DQ5THJ4 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
VPS13DQ5THJ4 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
VPS13DQ5THJ4 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC8.92□□□□□ -0.98
VPS13DQ5THJ4 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
VPS13DQ5THJ4 SLC7A9-201ENST00000023064 1761 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
VPS13DQ5THJ4 OR2A25-203ENST00000641663 1741 ntAPPRIS P1 BASIC8.92□□□□□ -0.98
VPS13DQ5THJ4 ALDOA-213ENST00000564595 1663 ntTSL 2 BASIC8.92□□□□□ -0.98
VPS13DQ5THJ4 PINX1-201ENST00000314787 1545 ntAPPRIS P3 TSL 1 (best) BASIC8.92□□□□□ -0.98
VPS13DQ5THJ4 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
VPS13DQ5THJ4 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC8.91□□□□□ -0.98
VPS13DQ5THJ4 AC069061.4-201ENST00000581294 1347 ntBASIC8.91□□□□□ -0.98
VPS13DQ5THJ4 TUSC8-201ENST00000432701 978 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
VPS13DQ5THJ4 COL18A1-AS2-201ENST00000446475 552 ntTSL 4 BASIC8.91□□□□□ -0.98
VPS13DQ5THJ4 CFL1P1-204ENST00000456375 424 ntTSL 3 BASIC8.91□□□□□ -0.98
VPS13DQ5THJ4 KRT18P63-201ENST00000505463 979 ntBASIC8.91□□□□□ -0.98
VPS13DQ5THJ4 AC104521.1-201ENST00000598582 279 ntTSL 5 BASIC8.91□□□□□ -0.98
VPS13DQ5THJ4 MAP3K14-205ENST00000617331 1049 ntTSL 5 BASIC8.91□□□□□ -0.98
VPS13DQ5THJ4 LINC00643-207ENST00000637212 734 ntBASIC8.91□□□□□ -0.98
VPS13DQ5THJ4 AC068987.3-201ENST00000637934 1195 ntTSL 5 BASIC8.91□□□□□ -0.98
VPS13DQ5THJ4 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC8.91□□□□□ -0.98
VPS13DQ5THJ4 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
VPS13DQ5THJ4 IP6K2-221ENST00000449610 1673 ntTSL 2 BASIC8.91□□□□□ -0.98
VPS13DQ5THJ4 KIR2DL4-204ENST00000359085 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
VPS13DQ5THJ4 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC8.91□□□□□ -0.98
VPS13DQ5THJ4 ST3GAL3-202ENST00000330208 1479 ntTSL 5 BASIC8.91□□□□□ -0.98
VPS13DQ5THJ4 IGHE-202ENST00000641420 1485 ntAPPRIS P5 BASIC8.91□□□□□ -0.98
VPS13DQ5THJ4 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
VPS13DQ5THJ4 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC8.91□□□□□ -0.98
VPS13DQ5THJ4 MGLL-202ENST00000398101 1414 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
VPS13DQ5THJ4 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
VPS13DQ5THJ4 SPC25-201ENST00000282074 1354 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
VPS13DQ5THJ4 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
VPS13DQ5THJ4 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
VPS13DQ5THJ4 TMEM256P1-201ENST00000430550 340 ntBASIC8.91□□□□□ -0.98
VPS13DQ5THJ4 AC002451.1-202ENST00000432265 771 ntTSL 2 BASIC8.91□□□□□ -0.98
VPS13DQ5THJ4 DIS3L2P1-201ENST00000509197 559 ntBASIC8.91□□□□□ -0.98
VPS13DQ5THJ4 SMIM14-205ENST00000511809 830 ntTSL 2 BASIC8.91□□□□□ -0.98
VPS13DQ5THJ4 MIR378I-201ENST00000582688 76 ntBASIC8.91□□□□□ -0.98
VPS13DQ5THJ4 RN7SL322P-201ENST00000583519 299 ntBASIC8.91□□□□□ -0.98
VPS13DQ5THJ4 AL139260.3-204ENST00000621281 609 ntAPPRIS P1 TSL 2 BASIC8.91□□□□□ -0.98
VPS13DQ5THJ4 MAGEB1-201ENST00000378981 1866 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
VPS13DQ5THJ4 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
VPS13DQ5THJ4 ITGB1BP1-201ENST00000238091 1772 ntTSL 3 BASIC8.91□□□□□ -0.98
VPS13DQ5THJ4 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
VPS13DQ5THJ4 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC8.91□□□□□ -0.98
VPS13DQ5THJ4 ZCCHC18-206ENST00000611638 2941 ntAPPRIS P1 TSL 2 BASIC8.91□□□□□ -0.98
VPS13DQ5THJ4 CAMK2B-202ENST00000346990 1448 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
VPS13DQ5THJ4 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC8.91□□□□□ -0.98
VPS13DQ5THJ4 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
VPS13DQ5THJ4 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
VPS13DQ5THJ4 RNF43-202ENST00000577625 2198 ntTSL 2 BASIC8.91□□□□□ -0.98
VPS13DQ5THJ4 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC8.91□□□□□ -0.98
VPS13DQ5THJ4 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
VPS13DQ5THJ4 PRDX2-202ENST00000334482 784 ntTSL 3 BASIC8.91□□□□□ -0.98
VPS13DQ5THJ4 SPINK4-201ENST00000379721 402 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
VPS13DQ5THJ4 MAS1LP1-206ENST00000419416 1047 ntBASIC8.91□□□□□ -0.98
VPS13DQ5THJ4 AC013269.2-201ENST00000422631 727 ntTSL 2 BASIC8.91□□□□□ -0.98
VPS13DQ5THJ4 LAMTOR5-203ENST00000474861 1154 ntTSL 2 BASIC8.91□□□□□ -0.98
VPS13DQ5THJ4 AL589666.1-201ENST00000503906 835 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
VPS13DQ5THJ4 AC092284.1-201ENST00000511386 1289 ntBASIC8.91□□□□□ -0.98
VPS13DQ5THJ4 RN7SL750P-201ENST00000582814 238 ntBASIC8.91□□□□□ -0.98
VPS13DQ5THJ4 FDPS-220ENST00000611010 1196 ntTSL 5 BASIC8.91□□□□□ -0.98
VPS13DQ5THJ4 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
VPS13DQ5THJ4 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC8.91□□□□□ -0.98
VPS13DQ5THJ4 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
VPS13DQ5THJ4 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
VPS13DQ5THJ4 FAM9A-201ENST00000381003 1519 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 169.1 ms