Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC16.32■□□□□ 0.2
IRX3P78415 AMT-256ENST00000638063 1783 ntTSL 5 BASIC16.32■□□□□ 0.2
IRX3P78415 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC16.32■□□□□ 0.2
IRX3P78415 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
IRX3P78415 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
IRX3P78415 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
IRX3P78415 MTHFR-210ENST00000641407 2387 ntBASIC16.31■□□□□ 0.2
IRX3P78415 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC16.31■□□□□ 0.2
IRX3P78415 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC16.31■□□□□ 0.2
IRX3P78415 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
IRX3P78415 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
IRX3P78415 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
IRX3P78415 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
IRX3P78415 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
IRX3P78415 ZDHHC6-201ENST00000369404 1721 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
IRX3P78415 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC16.31■□□□□ 0.2
IRX3P78415 NIPA1-207ENST00000561183 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
IRX3P78415 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
IRX3P78415 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
IRX3P78415 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
IRX3P78415 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC16.31■□□□□ 0.2
IRX3P78415 LUC7L2-208ENST00000541170 1525 ntTSL 2 BASIC16.31■□□□□ 0.2
IRX3P78415 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
IRX3P78415 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
IRX3P78415 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC16.31■□□□□ 0.2
IRX3P78415 PGAM2-201ENST00000297283 857 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
IRX3P78415 C11orf49-203ENST00000378618 1166 ntTSL 5 BASIC16.31■□□□□ 0.2
IRX3P78415 IGHV5-51-201ENST00000390626 410 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
IRX3P78415 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC16.31■□□□□ 0.2
IRX3P78415 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC16.31■□□□□ 0.2
IRX3P78415 DDX39AP1-201ENST00000445147 1181 ntBASIC16.31■□□□□ 0.2
IRX3P78415 EEF1GP8-201ENST00000506566 1154 ntBASIC16.31■□□□□ 0.2
IRX3P78415 RPS23-207ENST00000511844 530 ntTSL 2 BASIC16.31■□□□□ 0.2
IRX3P78415 AC012158.2-201ENST00000536546 354 ntBASIC16.31■□□□□ 0.2
IRX3P78415 AL132994.1-201ENST00000554098 400 ntBASIC16.31■□□□□ 0.2
IRX3P78415 MT2A-202ENST00000561491 581 ntTSL 2 BASIC16.31■□□□□ 0.2
IRX3P78415 AC130456.3-201ENST00000561762 633 ntTSL 3 BASIC16.31■□□□□ 0.2
IRX3P78415 AC023825.2-201ENST00000562970 672 ntTSL 2 BASIC16.31■□□□□ 0.2
IRX3P78415 AL118516.1-201ENST00000564152 670 ntBASIC16.31■□□□□ 0.2
IRX3P78415 LOXL1-AS1-207ENST00000565689 735 ntTSL 3 BASIC16.31■□□□□ 0.2
IRX3P78415 ACSM5-206ENST00000575584 1130 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
IRX3P78415 NT5C-204ENST00000578337 582 ntTSL 2 BASIC16.31■□□□□ 0.2
IRX3P78415 RN7SL455P-201ENST00000580629 282 ntBASIC16.31■□□□□ 0.2
IRX3P78415 AL009176.1-201ENST00000607876 650 ntBASIC16.31■□□□□ 0.2
IRX3P78415 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
IRX3P78415 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
IRX3P78415 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
IRX3P78415 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
IRX3P78415 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
IRX3P78415 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
IRX3P78415 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
IRX3P78415 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
IRX3P78415 ABR-228ENST00000574437 3196 ntTSL 5 BASIC16.31■□□□□ 0.2
IRX3P78415 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC16.31■□□□□ 0.2
IRX3P78415 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
IRX3P78415 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
IRX3P78415 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC16.31■□□□□ 0.2
IRX3P78415 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC16.31■□□□□ 0.2
IRX3P78415 TCAF2-201ENST00000357344 2958 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
IRX3P78415 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
IRX3P78415 TFIP11-201ENST00000405938 2896 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
IRX3P78415 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
IRX3P78415 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC16.31■□□□□ 0.2
IRX3P78415 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
IRX3P78415 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC16.3■□□□□ 0.2
IRX3P78415 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
IRX3P78415 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
IRX3P78415 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
IRX3P78415 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC16.3■□□□□ 0.2
IRX3P78415 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
IRX3P78415 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC16.3■□□□□ 0.2
IRX3P78415 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
IRX3P78415 AC011498.7-201ENST00000624986 2027 ntBASIC16.3■□□□□ 0.2
IRX3P78415 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
IRX3P78415 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC16.3■□□□□ 0.2
IRX3P78415 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
IRX3P78415 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC16.3■□□□□ 0.2
IRX3P78415 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
IRX3P78415 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
IRX3P78415 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC16.3■□□□□ 0.2
IRX3P78415 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC16.3■□□□□ 0.2
IRX3P78415 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC16.3■□□□□ 0.2
IRX3P78415 HPGD-201ENST00000296521 1171 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
IRX3P78415 LCE2C-201ENST00000368783 614 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
IRX3P78415 SURF4-203ENST00000371991 715 ntTSL 3 BASIC16.3■□□□□ 0.2
IRX3P78415 MIR1301-201ENST00000408518 82 ntBASIC16.3■□□□□ 0.2
IRX3P78415 AL158166.1-201ENST00000433110 371 ntTSL 2 BASIC16.3■□□□□ 0.2
IRX3P78415 FAU-202ENST00000434372 533 ntTSL 2 BASIC16.3■□□□□ 0.2
IRX3P78415 KRT18P46-201ENST00000435568 1279 ntBASIC16.3■□□□□ 0.2
IRX3P78415 AL355537.2-201ENST00000453367 375 ntTSL 2 BASIC16.3■□□□□ 0.2
IRX3P78415 AC063952.3-201ENST00000467756 308 ntBASIC16.3■□□□□ 0.2
IRX3P78415 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC16.3■□□□□ 0.2
IRX3P78415 LINC02228-201ENST00000507600 534 ntTSL 2 BASIC16.3■□□□□ 0.2
IRX3P78415 LINC02171-201ENST00000508619 1033 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
IRX3P78415 AC100858.1-201ENST00000514059 1228 ntBASIC16.3■□□□□ 0.2
IRX3P78415 IMMP1L-202ENST00000526776 469 ntTSL 3 BASIC16.3■□□□□ 0.2
IRX3P78415 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC16.3■□□□□ 0.2
IRX3P78415 SLC25A21-203ENST00000555449 1023 ntAPPRIS ALT1 TSL 2 BASIC16.3■□□□□ 0.2
IRX3P78415 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC16.3■□□□□ 0.2
IRX3P78415 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms