Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 AC125807.2-201ENST00000513358 3514 ntBASIC12.17□□□□□ -0.46
UBA52P62987 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC12.17□□□□□ -0.46
UBA52P62987 KRT8P19-201ENST00000551916 1455 ntBASIC12.17□□□□□ -0.46
UBA52P62987 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC12.17□□□□□ -0.46
UBA52P62987 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
UBA52P62987 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
UBA52P62987 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
UBA52P62987 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
UBA52P62987 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC12.17□□□□□ -0.46
UBA52P62987 GGCT-203ENST00000409144 836 ntTSL 2 BASIC12.17□□□□□ -0.46
UBA52P62987 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC12.17□□□□□ -0.46
UBA52P62987 HINT2P1-201ENST00000419438 481 ntBASIC12.17□□□□□ -0.46
UBA52P62987 AC016700.1-201ENST00000429424 312 ntBASIC12.17□□□□□ -0.46
UBA52P62987 AL133466.1-201ENST00000447582 150 ntBASIC12.17□□□□□ -0.46
UBA52P62987 SERPINA13P-202ENST00000478994 924 ntBASIC12.17□□□□□ -0.46
UBA52P62987 TSACC-208ENST00000481479 741 ntTSL 2 BASIC12.17□□□□□ -0.46
UBA52P62987 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC12.17□□□□□ -0.46
UBA52P62987 AC245884.6-201ENST00000515672 1067 ntBASIC12.17□□□□□ -0.46
UBA52P62987 NCK2-206ENST00000522586 490 ntTSL 5 BASIC12.17□□□□□ -0.46
UBA52P62987 FXYD6-202ENST00000524656 1033 ntAPPRIS P2 TSL 3 BASIC12.17□□□□□ -0.46
UBA52P62987 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
UBA52P62987 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC12.17□□□□□ -0.46
UBA52P62987 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC12.17□□□□□ -0.46
UBA52P62987 RN7SL713P-201ENST00000582127 302 ntBASIC12.17□□□□□ -0.46
UBA52P62987 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC12.17□□□□□ -0.46
UBA52P62987 OR10B1P-201ENST00000601666 907 ntBASIC12.17□□□□□ -0.46
UBA52P62987 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
UBA52P62987 ZACNP1-201ENST00000612259 710 ntBASIC12.17□□□□□ -0.46
UBA52P62987 AC091812.3-201ENST00000621362 345 ntBASIC12.17□□□□□ -0.46
UBA52P62987 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
UBA52P62987 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
UBA52P62987 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC12.17□□□□□ -0.46
UBA52P62987 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
UBA52P62987 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC12.17□□□□□ -0.46
UBA52P62987 CHRNA2-207ENST00000520933 2497 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
UBA52P62987 SIRT2-201ENST00000249396 2070 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
UBA52P62987 SIRT2-204ENST00000392081 2062 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
UBA52P62987 TRAPPC9-201ENST00000389328 4474 ntTSL 2 BASIC12.17□□□□□ -0.46
UBA52P62987 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
UBA52P62987 FAM120C-202ENST00000375180 8057 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
UBA52P62987 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
UBA52P62987 PCDHGA5-201ENST00000518069 4602 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
UBA52P62987 TRAF6-202ENST00000526995 4627 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
UBA52P62987 RAB11FIP1-202ENST00000330843 7811 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
UBA52P62987 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
UBA52P62987 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
UBA52P62987 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC12.16□□□□□ -0.46
UBA52P62987 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
UBA52P62987 ADRA2B-201ENST00000620793 3371 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
UBA52P62987 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
UBA52P62987 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
UBA52P62987 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
UBA52P62987 AC010970.1-201ENST00000445125 1848 ntBASIC12.16□□□□□ -0.46
UBA52P62987 YWHAEP7-202ENST00000620903 2455 ntTSL 2 BASIC12.16□□□□□ -0.46
UBA52P62987 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
UBA52P62987 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
UBA52P62987 TRPM5-201ENST00000155858 3929 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
UBA52P62987 ZSWIM3-201ENST00000255152 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
UBA52P62987 KCTD9-201ENST00000221200 3401 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
UBA52P62987 DLGAP1-201ENST00000315677 6683 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
UBA52P62987 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
UBA52P62987 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC12.16□□□□□ -0.46
UBA52P62987 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
UBA52P62987 LINC01301-202ENST00000506428 2444 ntTSL 2 BASIC12.16□□□□□ -0.46
UBA52P62987 SYNCRIP-201ENST00000355238 6449 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
UBA52P62987 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC12.16□□□□□ -0.46
UBA52P62987 NHEJ1-201ENST00000356853 2094 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
UBA52P62987 HSPA8P5-201ENST00000456928 2069 ntBASIC12.16□□□□□ -0.46
UBA52P62987 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
UBA52P62987 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC12.16□□□□□ -0.46
UBA52P62987 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
UBA52P62987 CYP46A4P-201ENST00000414953 267 ntBASIC12.16□□□□□ -0.46
UBA52P62987 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
UBA52P62987 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
UBA52P62987 NKAIN1P1-201ENST00000435754 582 ntBASIC12.16□□□□□ -0.46
UBA52P62987 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC12.16□□□□□ -0.46
UBA52P62987 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
UBA52P62987 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC12.16□□□□□ -0.46
UBA52P62987 AC044849.1-201ENST00000519737 1188 ntBASIC12.16□□□□□ -0.46
UBA52P62987 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
UBA52P62987 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
UBA52P62987 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC12.16□□□□□ -0.46
UBA52P62987 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC12.16□□□□□ -0.46
UBA52P62987 CHMP4BP1-201ENST00000556017 588 ntBASIC12.16□□□□□ -0.46
UBA52P62987 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC12.16□□□□□ -0.46
UBA52P62987 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC12.16□□□□□ -0.46
UBA52P62987 INCENP-202ENST00000394818 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
UBA52P62987 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
UBA52P62987 ZNF568-206ENST00000455427 2378 ntTSL 2 BASIC12.16□□□□□ -0.46
UBA52P62987 MAP2K4P1-202ENST00000602584 2539 ntTSL 2 BASIC12.16□□□□□ -0.46
UBA52P62987 NIN-206ENST00000453196 6785 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
UBA52P62987 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
UBA52P62987 KREMEN1-202ENST00000400335 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
UBA52P62987 NOX5-202ENST00000388866 2804 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
UBA52P62987 SH3TC1-201ENST00000245105 4226 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
UBA52P62987 RERE-202ENST00000377464 6733 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
UBA52P62987 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
UBA52P62987 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC12.16□□□□□ -0.46
UBA52P62987 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC12.16□□□□□ -0.46
UBA52P62987 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC12.16□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms