Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 INTS4P2-202ENST00000614726 2019 ntBASIC12.52□□□□□ -0.4
VBP1P61758 BIVM-ERCC5-205ENST00000639435 5632 ntAPPRIS P5 TSL 5 BASIC12.52□□□□□ -0.4
VBP1P61758 ARHGAP30-201ENST00000368013 4394 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
VBP1P61758 SMG7-214ENST00000508461 3985 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.4
VBP1P61758 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC12.52□□□□□ -0.4
VBP1P61758 CLTCL1-210ENST00000617926 1695 ntTSL 2 BASIC12.52□□□□□ -0.4
VBP1P61758 TOP3B-202ENST00000398793 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
VBP1P61758 IP6K1-202ENST00000395238 4117 ntTSL 3 BASIC12.52□□□□□ -0.4
VBP1P61758 STXBP5L-201ENST00000273666 9496 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
VBP1P61758 SRC-204ENST00000373578 4630 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
VBP1P61758 NPR2-201ENST00000342694 3686 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
VBP1P61758 PRR3-201ENST00000376557 1797 ntTSL 2 BASIC12.52□□□□□ -0.41
VBP1P61758 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
VBP1P61758 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
VBP1P61758 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
VBP1P61758 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC12.52□□□□□ -0.41
VBP1P61758 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC12.52□□□□□ -0.41
VBP1P61758 PTPA-215ENST00000432124 567 ntTSL 4 BASIC12.52□□□□□ -0.41
VBP1P61758 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC12.52□□□□□ -0.41
VBP1P61758 GNAQP1-201ENST00000444815 1067 ntBASIC12.52□□□□□ -0.41
VBP1P61758 NMU-202ENST00000505262 693 ntTSL 3 BASIC12.52□□□□□ -0.41
VBP1P61758 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC12.52□□□□□ -0.41
VBP1P61758 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC12.52□□□□□ -0.41
VBP1P61758 RARRES2P5-201ENST00000564013 466 ntBASIC12.52□□□□□ -0.41
VBP1P61758 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC12.52□□□□□ -0.41
VBP1P61758 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC12.52□□□□□ -0.41
VBP1P61758 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC12.52□□□□□ -0.41
VBP1P61758 RAB34-223ENST00000636154 730 ntTSL 2 BASIC12.52□□□□□ -0.41
VBP1P61758 SCN8A-209ENST00000627620 5943 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.41
VBP1P61758 HPSE2-201ENST00000370546 1849 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
VBP1P61758 SRPK3-208ENST00000489426 4479 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
VBP1P61758 AC027020.2-201ENST00000602585 2389 ntBASIC12.52□□□□□ -0.41
VBP1P61758 OGFR-202ENST00000370461 4506 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
VBP1P61758 PRAMEF25-201ENST00000614839 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
VBP1P61758 PRAMEF26-201ENST00000624207 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
VBP1P61758 LRPAP1-202ENST00000500728 7819 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
VBP1P61758 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
VBP1P61758 PML-207ENST00000435786 3643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
VBP1P61758 ANP32E-210ENST00000629042 3054 ntTSL 5 BASIC12.52□□□□□ -0.41
VBP1P61758 CATSPERD-202ENST00000381624 2516 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
VBP1P61758 GOLGA8O-201ENST00000509311 1997 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.41
VBP1P61758 DFFA-202ENST00000377038 6032 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
VBP1P61758 LINC00442-202ENST00000456737 2063 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
VBP1P61758 DGCR2-206ENST00000545799 4484 ntTSL 5 BASIC12.52□□□□□ -0.41
VBP1P61758 JAM3-201ENST00000299106 3912 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
VBP1P61758 GYG2-204ENST00000381163 3393 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
VBP1P61758 PKP4P1-201ENST00000426801 2158 ntBASIC12.52□□□□□ -0.41
VBP1P61758 PHF20-203ENST00000374012 5922 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
VBP1P61758 AP001046.1-201ENST00000435702 2816 ntTSL 2 BASIC12.52□□□□□ -0.41
VBP1P61758 PSMC4-201ENST00000157812 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
VBP1P61758 PLEKHG5-202ENST00000377725 3475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
VBP1P61758 CBR4-202ENST00000504480 1602 ntTSL 2 BASIC12.51□□□□□ -0.41
VBP1P61758 HCFC1-202ENST00000369984 8375 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
VBP1P61758 AC009549.1-201ENST00000603468 1686 ntBASIC12.51□□□□□ -0.41
VBP1P61758 EPB41L5-205ENST00000452780 6410 ntTSL 5 BASIC12.51□□□□□ -0.41
VBP1P61758 NQO2-205ENST00000380455 10084 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
VBP1P61758 ABI1-212ENST00000490841 3188 ntTSL 2 BASIC12.51□□□□□ -0.41
VBP1P61758 SP7-202ENST00000536324 3151 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
VBP1P61758 AC009108.4-201ENST00000623284 2451 ntBASIC12.51□□□□□ -0.41
VBP1P61758 AC008040.5-201ENST00000599781 1781 ntBASIC12.51□□□□□ -0.41
VBP1P61758 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
VBP1P61758 TRIM21-201ENST00000254436 1924 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
VBP1P61758 ENOX2-201ENST00000338144 4263 ntTSL 2 BASIC12.51□□□□□ -0.41
VBP1P61758 AL357140.3-201ENST00000639753 1983 ntBASIC12.51□□□□□ -0.41
VBP1P61758 STK11IP-204ENST00000456909 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
VBP1P61758 FMO1-203ENST00000402921 2003 ntTSL 2 BASIC12.51□□□□□ -0.41
VBP1P61758 MYLK-204ENST00000360304 7738 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
VBP1P61758 DHX30-206ENST00000446256 3660 ntAPPRIS P2 TSL 2 BASIC12.51□□□□□ -0.41
VBP1P61758 MYO1D-202ENST00000394649 5451 ntTSL 5 BASIC12.51□□□□□ -0.41
VBP1P61758 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
VBP1P61758 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC12.51□□□□□ -0.41
VBP1P61758 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
VBP1P61758 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC12.51□□□□□ -0.41
VBP1P61758 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC12.51□□□□□ -0.41
VBP1P61758 PNKD-204ENST00000436005 978 ntTSL 5 BASIC12.51□□□□□ -0.41
VBP1P61758 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC12.51□□□□□ -0.41
VBP1P61758 AL391280.1-201ENST00000506969 1062 ntBASIC12.51□□□□□ -0.41
VBP1P61758 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC12.51□□□□□ -0.41
VBP1P61758 AL512310.5-201ENST00000551999 515 ntBASIC12.51□□□□□ -0.41
VBP1P61758 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC12.51□□□□□ -0.41
VBP1P61758 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC12.51□□□□□ -0.41
VBP1P61758 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC12.51□□□□□ -0.41
VBP1P61758 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC12.51□□□□□ -0.41
VBP1P61758 AC138466.3-201ENST00000619983 221 ntBASIC12.51□□□□□ -0.41
VBP1P61758 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
VBP1P61758 LDLR-207ENST00000558013 3144 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
VBP1P61758 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
VBP1P61758 C10orf76-202ENST00000370033 4119 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
VBP1P61758 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
VBP1P61758 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
VBP1P61758 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
VBP1P61758 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
VBP1P61758 TSPEAR-203ENST00000613245 3524 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
VBP1P61758 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC12.51□□□□□ -0.41
VBP1P61758 TMEM86A-201ENST00000280734 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
VBP1P61758 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
VBP1P61758 ADNP-203ENST00000396029 6261 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
VBP1P61758 POFUT2-203ENST00000349485 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
VBP1P61758 RUBCN-202ENST00000296343 2919 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
VBP1P61758 PERP-201ENST00000421351 4290 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms