Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC12.59□□□□□ -0.39
SUMO3P55854 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC12.59□□□□□ -0.39
SUMO3P55854 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC12.59□□□□□ -0.39
SUMO3P55854 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC12.59□□□□□ -0.39
SUMO3P55854 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC12.59□□□□□ -0.39
SUMO3P55854 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SUMO3P55854 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC12.59□□□□□ -0.39
SUMO3P55854 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC12.59□□□□□ -0.39
SUMO3P55854 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC12.59□□□□□ -0.39
SUMO3P55854 ADSSL1-208ENST00000555674 520 ntTSL 3 BASIC12.59□□□□□ -0.39
SUMO3P55854 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC12.59□□□□□ -0.39
SUMO3P55854 MT3-203ENST00000565838 421 ntTSL 3 BASIC12.59□□□□□ -0.39
SUMO3P55854 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC12.59□□□□□ -0.39
SUMO3P55854 AL133499.1-201ENST00000596207 608 ntBASIC12.59□□□□□ -0.39
SUMO3P55854 AC087392.5-201ENST00000612517 489 ntBASIC12.59□□□□□ -0.39
SUMO3P55854 AC091769.1-201ENST00000619576 568 ntBASIC12.59□□□□□ -0.39
SUMO3P55854 SMIM11B-202ENST00000619874 843 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SUMO3P55854 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
SUMO3P55854 AP001184.1-201ENST00000637936 376 ntBASIC12.59□□□□□ -0.39
SUMO3P55854 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SUMO3P55854 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SUMO3P55854 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
SUMO3P55854 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC12.59□□□□□ -0.39
SUMO3P55854 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC12.59□□□□□ -0.39
SUMO3P55854 DDX46-212ENST00000628477 1584 ntTSL 5 BASIC12.59□□□□□ -0.39
SUMO3P55854 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SUMO3P55854 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
SUMO3P55854 MSNP1-201ENST00000511640 1732 ntBASIC12.59□□□□□ -0.39
SUMO3P55854 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
SUMO3P55854 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
SUMO3P55854 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SUMO3P55854 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC12.59□□□□□ -0.39
SUMO3P55854 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
SUMO3P55854 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.39
SUMO3P55854 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC12.58□□□□□ -0.39
SUMO3P55854 LSS-211ENST00000522411 2523 ntTSL 2 BASIC12.58□□□□□ -0.4
SUMO3P55854 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SUMO3P55854 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SUMO3P55854 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
SUMO3P55854 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
SUMO3P55854 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
SUMO3P55854 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SUMO3P55854 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
SUMO3P55854 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC12.58□□□□□ -0.4
SUMO3P55854 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SUMO3P55854 PHKG1-201ENST00000297373 1431 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
SUMO3P55854 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SUMO3P55854 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC12.58□□□□□ -0.4
SUMO3P55854 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SUMO3P55854 AL512430.1-201ENST00000392575 860 ntBASIC12.58□□□□□ -0.4
SUMO3P55854 AC026316.1-201ENST00000398900 414 ntBASIC12.58□□□□□ -0.4
SUMO3P55854 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
SUMO3P55854 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC12.58□□□□□ -0.4
SUMO3P55854 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC12.58□□□□□ -0.4
SUMO3P55854 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
SUMO3P55854 NME7-203ENST00000472647 1590 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
SUMO3P55854 RN7SL564P-201ENST00000496309 250 ntBASIC12.58□□□□□ -0.4
SUMO3P55854 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC12.58□□□□□ -0.4
SUMO3P55854 PRSS3P1-201ENST00000503996 742 ntBASIC12.58□□□□□ -0.4
SUMO3P55854 MRPL22P1-201ENST00000505398 616 ntBASIC12.58□□□□□ -0.4
SUMO3P55854 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC12.58□□□□□ -0.4
SUMO3P55854 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC12.58□□□□□ -0.4
SUMO3P55854 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC12.58□□□□□ -0.4
SUMO3P55854 NEU3-205ENST00000531619 582 ntTSL 5 BASIC12.58□□□□□ -0.4
SUMO3P55854 AC105129.2-201ENST00000559536 390 ntBASIC12.58□□□□□ -0.4
SUMO3P55854 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC12.58□□□□□ -0.4
SUMO3P55854 ZNF571-AS1-204ENST00000587121 822 ntTSL 3 BASIC12.58□□□□□ -0.4
SUMO3P55854 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SUMO3P55854 SNAPC2-206ENST00000597584 1413 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SUMO3P55854 AC103691.2-201ENST00000618824 433 ntBASIC12.58□□□□□ -0.4
SUMO3P55854 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC12.58□□□□□ -0.4
SUMO3P55854 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SUMO3P55854 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC12.58□□□□□ -0.4
SUMO3P55854 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
SUMO3P55854 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC12.58□□□□□ -0.4
SUMO3P55854 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC12.58□□□□□ -0.4
SUMO3P55854 NT5DC4-201ENST00000327581 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SUMO3P55854 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC12.58□□□□□ -0.4
SUMO3P55854 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SUMO3P55854 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
SUMO3P55854 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SUMO3P55854 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SUMO3P55854 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
SUMO3P55854 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SUMO3P55854 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SUMO3P55854 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SUMO3P55854 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SUMO3P55854 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SUMO3P55854 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SUMO3P55854 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
SUMO3P55854 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
SUMO3P55854 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SUMO3P55854 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SUMO3P55854 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SUMO3P55854 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SUMO3P55854 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
SUMO3P55854 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC12.57□□□□□ -0.4
SUMO3P55854 ANXA5-202ENST00000501272 1363 ntTSL 5 BASIC12.57□□□□□ -0.4
SUMO3P55854 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC12.57□□□□□ -0.4
SUMO3P55854 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms