Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
NCKAP1LP55160 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
NCKAP1LP55160 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
NCKAP1LP55160 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
NCKAP1LP55160 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC15.2■□□□□ 0.02
NCKAP1LP55160 LINC00969-231ENST00000597482 1476 ntTSL 5 BASIC15.2■□□□□ 0.02
NCKAP1LP55160 DANT2-201ENST00000430756 2079 ntTSL 3 BASIC15.2■□□□□ 0.02
NCKAP1LP55160 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NCKAP1LP55160 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NCKAP1LP55160 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
NCKAP1LP55160 F2-205ENST00000530231 1849 ntTSL 5 BASIC15.2■□□□□ 0.02
NCKAP1LP55160 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NCKAP1LP55160 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC15.19■□□□□ 0.02
NCKAP1LP55160 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NCKAP1LP55160 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NCKAP1LP55160 SETMAR-205ENST00000425863 1657 ntTSL 2 BASIC15.19■□□□□ 0.02
NCKAP1LP55160 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
NCKAP1LP55160 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NCKAP1LP55160 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC15.19■□□□□ 0.02
NCKAP1LP55160 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
NCKAP1LP55160 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NCKAP1LP55160 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
NCKAP1LP55160 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC15.19■□□□□ 0.02
NCKAP1LP55160 ALG11-204ENST00000616513 1983 ntTSL 2 BASIC15.19■□□□□ 0.02
NCKAP1LP55160 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NCKAP1LP55160 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NCKAP1LP55160 HINT2P1-201ENST00000419438 481 ntBASIC15.19■□□□□ 0.02
NCKAP1LP55160 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC15.19■□□□□ 0.02
NCKAP1LP55160 AC098935.1-201ENST00000446057 611 ntBASIC15.19■□□□□ 0.02
NCKAP1LP55160 RN7SL375P-201ENST00000492442 298 ntBASIC15.19■□□□□ 0.02
NCKAP1LP55160 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC15.19■□□□□ 0.02
NCKAP1LP55160 BATF-202ENST00000555504 361 ntTSL 2 BASIC15.19■□□□□ 0.02
NCKAP1LP55160 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC15.19■□□□□ 0.02
NCKAP1LP55160 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC15.19■□□□□ 0.02
NCKAP1LP55160 AC087045.2-201ENST00000606279 1003 ntBASIC15.19■□□□□ 0.02
NCKAP1LP55160 AC018635.2-201ENST00000608625 364 ntBASIC15.19■□□□□ 0.02
NCKAP1LP55160 AC107464.3-201ENST00000609172 737 ntBASIC15.19■□□□□ 0.02
NCKAP1LP55160 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
NCKAP1LP55160 SPATA12-201ENST00000334325 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NCKAP1LP55160 FAM156A-208ENST00000615092 2098 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
NCKAP1LP55160 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
NCKAP1LP55160 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC15.19■□□□□ 0.02
NCKAP1LP55160 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC15.19■□□□□ 0.02
NCKAP1LP55160 AC005014.1-201ENST00000432006 2976 ntBASIC15.19■□□□□ 0.02
NCKAP1LP55160 MUC1-225ENST00000612778 1836 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
NCKAP1LP55160 AC005252.3-201ENST00000623855 2258 ntBASIC15.19■□□□□ 0.02
NCKAP1LP55160 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NCKAP1LP55160 AC105206.1-202ENST00000314927 2368 ntBASIC15.19■□□□□ 0.02
NCKAP1LP55160 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC15.19■□□□□ 0.02
NCKAP1LP55160 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
NCKAP1LP55160 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
NCKAP1LP55160 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NCKAP1LP55160 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NCKAP1LP55160 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NCKAP1LP55160 HADH-202ENST00000403312 1752 ntTSL 5 BASIC15.19■□□□□ 0.02
NCKAP1LP55160 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NCKAP1LP55160 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NCKAP1LP55160 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NCKAP1LP55160 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC15.18■□□□□ 0.02
NCKAP1LP55160 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC15.18■□□□□ 0.02
NCKAP1LP55160 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC15.18■□□□□ 0.02
NCKAP1LP55160 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NCKAP1LP55160 INO80C-202ENST00000334598 974 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NCKAP1LP55160 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC15.18■□□□□ 0.02
NCKAP1LP55160 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
NCKAP1LP55160 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC15.18■□□□□ 0.02
NCKAP1LP55160 LINC01114-202ENST00000424321 2112 ntTSL 2 BASIC15.18■□□□□ 0.02
NCKAP1LP55160 AL022332.1-202ENST00000432495 426 ntTSL 3 BASIC15.18■□□□□ 0.02
NCKAP1LP55160 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC15.18■□□□□ 0.02
NCKAP1LP55160 DPY19L2P5-201ENST00000456300 331 ntBASIC15.18■□□□□ 0.02
NCKAP1LP55160 DNM1P30-201ENST00000563586 452 ntBASIC15.18■□□□□ 0.02
NCKAP1LP55160 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC15.18■□□□□ 0.02
NCKAP1LP55160 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC15.18■□□□□ 0.02
NCKAP1LP55160 RN7SL357P-201ENST00000581065 298 ntBASIC15.18■□□□□ 0.02
NCKAP1LP55160 SEPT14P19-201ENST00000587432 336 ntTSL 2 BASIC15.18■□□□□ 0.02
NCKAP1LP55160 AP001269.2-201ENST00000590055 379 ntTSL 3 BASIC15.18■□□□□ 0.02
NCKAP1LP55160 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC15.18■□□□□ 0.02
NCKAP1LP55160 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NCKAP1LP55160 CCDC178-201ENST00000300227 3087 ntAPPRIS P3 TSL 2 BASIC15.18■□□□□ 0.02
NCKAP1LP55160 SLC7A8-214ENST00000621729 1371 ntTSL 5 BASIC15.18■□□□□ 0.02
NCKAP1LP55160 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NCKAP1LP55160 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
NCKAP1LP55160 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
NCKAP1LP55160 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
NCKAP1LP55160 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
NCKAP1LP55160 DLG2-205ENST00000398301 2070 ntTSL 2 BASIC15.18■□□□□ 0.02
NCKAP1LP55160 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
NCKAP1LP55160 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC15.18■□□□□ 0.02
NCKAP1LP55160 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
NCKAP1LP55160 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NCKAP1LP55160 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NCKAP1LP55160 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
NCKAP1LP55160 FAM153C-201ENST00000398106 1510 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
NCKAP1LP55160 MEFV-203ENST00000536379 1713 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
NCKAP1LP55160 RIN2-202ENST00000440354 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
NCKAP1LP55160 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC15.17■□□□□ 0.02
NCKAP1LP55160 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC15.17■□□□□ 0.02
NCKAP1LP55160 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NCKAP1LP55160 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NCKAP1LP55160 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms