Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
EFNA3P52797 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
EFNA3P52797 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC13.03□□□□□ -0.32
EFNA3P52797 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
EFNA3P52797 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
EFNA3P52797 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
EFNA3P52797 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
EFNA3P52797 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC13.03□□□□□ -0.32
EFNA3P52797 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
EFNA3P52797 IMMT-212ENST00000620815 1520 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
EFNA3P52797 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC13.03□□□□□ -0.32
EFNA3P52797 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
EFNA3P52797 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
EFNA3P52797 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
EFNA3P52797 AC072061.1-201ENST00000569710 2234 ntBASIC13.03□□□□□ -0.32
EFNA3P52797 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
EFNA3P52797 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC13.02□□□□□ -0.32
EFNA3P52797 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
EFNA3P52797 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC13.02□□□□□ -0.32
EFNA3P52797 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
EFNA3P52797 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
EFNA3P52797 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC13.02□□□□□ -0.32
EFNA3P52797 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.32
EFNA3P52797 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC13.02□□□□□ -0.32
EFNA3P52797 PGD-201ENST00000270776 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
EFNA3P52797 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
EFNA3P52797 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
EFNA3P52797 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
EFNA3P52797 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
EFNA3P52797 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
EFNA3P52797 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
EFNA3P52797 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
EFNA3P52797 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
EFNA3P52797 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
EFNA3P52797 RN7SL767P-201ENST00000493013 295 ntBASIC13.02□□□□□ -0.33
EFNA3P52797 LINC00634-202ENST00000505157 222 ntBASIC13.02□□□□□ -0.33
EFNA3P52797 HINT1-205ENST00000508488 703 ntTSL 2 BASIC13.02□□□□□ -0.33
EFNA3P52797 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC13.02□□□□□ -0.33
EFNA3P52797 RN7SKP155-201ENST00000516031 288 ntBASIC13.02□□□□□ -0.33
EFNA3P52797 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC13.02□□□□□ -0.33
EFNA3P52797 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC13.02□□□□□ -0.33
EFNA3P52797 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC13.02□□□□□ -0.33
EFNA3P52797 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC13.02□□□□□ -0.33
EFNA3P52797 GARS-210ENST00000627489 324 ntTSL 4 BASIC13.02□□□□□ -0.33
EFNA3P52797 AL031595.1-201ENST00000623969 4709 ntBASIC13.02□□□□□ -0.33
EFNA3P52797 CNTNAP3P2-201ENST00000617175 3861 ntBASIC13.02□□□□□ -0.33
EFNA3P52797 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
EFNA3P52797 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
EFNA3P52797 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
EFNA3P52797 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
EFNA3P52797 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
EFNA3P52797 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
EFNA3P52797 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
EFNA3P52797 DMBT1P1-203ENST00000636837 4628 ntBASIC13.02□□□□□ -0.33
EFNA3P52797 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
EFNA3P52797 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC13.02□□□□□ -0.33
EFNA3P52797 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
EFNA3P52797 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
EFNA3P52797 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
EFNA3P52797 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
EFNA3P52797 AC041040.2-201ENST00000622926 2899 ntBASIC13.02□□□□□ -0.33
EFNA3P52797 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC13.02□□□□□ -0.33
EFNA3P52797 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
EFNA3P52797 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
EFNA3P52797 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
EFNA3P52797 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC13.01□□□□□ -0.33
EFNA3P52797 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC13.01□□□□□ -0.33
EFNA3P52797 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
EFNA3P52797 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
EFNA3P52797 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
EFNA3P52797 MORN4-201ENST00000307450 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
EFNA3P52797 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC13.01□□□□□ -0.33
EFNA3P52797 USP3-204ENST00000540797 5474 ntTSL 2 BASIC13.01□□□□□ -0.33
EFNA3P52797 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
EFNA3P52797 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
EFNA3P52797 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC13.01□□□□□ -0.33
EFNA3P52797 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
EFNA3P52797 LSS-201ENST00000356396 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
EFNA3P52797 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
EFNA3P52797 AC104581.4-201ENST00000623126 3052 ntBASIC13.01□□□□□ -0.33
EFNA3P52797 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
EFNA3P52797 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
EFNA3P52797 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC13.01□□□□□ -0.33
EFNA3P52797 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
EFNA3P52797 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
EFNA3P52797 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
EFNA3P52797 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
EFNA3P52797 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC13.01□□□□□ -0.33
EFNA3P52797 AK2P2-201ENST00000439142 405 ntBASIC13.01□□□□□ -0.33
EFNA3P52797 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC13.01□□□□□ -0.33
EFNA3P52797 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC13.01□□□□□ -0.33
EFNA3P52797 MUTYH-231ENST00000488731 740 ntTSL 5 BASIC13.01□□□□□ -0.33
EFNA3P52797 CTBP2P4-201ENST00000513884 920 ntBASIC13.01□□□□□ -0.33
EFNA3P52797 RMDN1-218ENST00000523911 950 ntTSL 2 BASIC13.01□□□□□ -0.33
EFNA3P52797 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC13.01□□□□□ -0.33
EFNA3P52797 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC13.01□□□□□ -0.33
EFNA3P52797 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC13.01□□□□□ -0.33
EFNA3P52797 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC13.01□□□□□ -0.33
EFNA3P52797 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
EFNA3P52797 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms