Protein–RNA interactions for Protein: P50458

LHX2, LIM/homeobox protein Lhx2, humanhuman

Predictions only

Length 406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX2P50458 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC12.4□□□□□ -0.43
LHX2P50458 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.43
LHX2P50458 RCC2P5-201ENST00000492126 1487 ntBASIC12.4□□□□□ -0.43
LHX2P50458 AL359881.3-201ENST00000602640 1721 ntBASIC12.4□□□□□ -0.43
LHX2P50458 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.43
LHX2P50458 AC072061.1-201ENST00000569710 2234 ntBASIC12.39□□□□□ -0.43
LHX2P50458 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
LHX2P50458 AL365181.3-201ENST00000605886 3222 ntBASIC12.39□□□□□ -0.43
LHX2P50458 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
LHX2P50458 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
LHX2P50458 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC12.39□□□□□ -0.43
LHX2P50458 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LHX2P50458 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LHX2P50458 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
LHX2P50458 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LHX2P50458 KCP-203ENST00000610776 5108 ntTSL 5 BASIC12.39□□□□□ -0.43
LHX2P50458 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LHX2P50458 CCDC138-203ENST00000412964 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
LHX2P50458 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC12.39□□□□□ -0.43
LHX2P50458 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
LHX2P50458 KCTD6-202ENST00000404589 1533 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
LHX2P50458 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LHX2P50458 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
LHX2P50458 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LHX2P50458 VPREB1-202ENST00000403807 755 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
LHX2P50458 AC147651.3-201ENST00000429872 731 ntTSL 2 BASIC12.39□□□□□ -0.43
LHX2P50458 AC093826.1-201ENST00000508655 993 ntBASIC12.39□□□□□ -0.43
LHX2P50458 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
LHX2P50458 COX5A-205ENST00000568517 582 ntTSL 3 BASIC12.39□□□□□ -0.43
LHX2P50458 SEPT14P19-201ENST00000587432 336 ntTSL 2 BASIC12.39□□□□□ -0.43
LHX2P50458 AL356740.1-201ENST00000602192 1297 ntBASIC12.39□□□□□ -0.43
LHX2P50458 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC12.39□□□□□ -0.43
LHX2P50458 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC12.39□□□□□ -0.43
LHX2P50458 YIPF1-201ENST00000072644 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LHX2P50458 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
LHX2P50458 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LHX2P50458 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
LHX2P50458 FUCA1P1-201ENST00000374476 1351 ntBASIC12.39□□□□□ -0.43
LHX2P50458 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
LHX2P50458 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC12.39□□□□□ -0.43
LHX2P50458 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC12.39□□□□□ -0.43
LHX2P50458 AC025271.4-201ENST00000621477 1726 ntBASIC12.39□□□□□ -0.43
LHX2P50458 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LHX2P50458 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
LHX2P50458 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC12.39□□□□□ -0.43
LHX2P50458 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC12.39□□□□□ -0.43
LHX2P50458 AL365181.1-201ENST00000564032 1828 ntBASIC12.39□□□□□ -0.43
LHX2P50458 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
LHX2P50458 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
LHX2P50458 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LHX2P50458 AC245140.2-201ENST00000624054 1939 ntBASIC12.39□□□□□ -0.43
LHX2P50458 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
LHX2P50458 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LHX2P50458 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LHX2P50458 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
LHX2P50458 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
LHX2P50458 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LHX2P50458 CTBP2P8-201ENST00000422584 1330 ntBASIC12.38□□□□□ -0.43
LHX2P50458 ARL1-202ENST00000536227 1322 ntTSL 2 BASIC12.38□□□□□ -0.43
LHX2P50458 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
LHX2P50458 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC12.38□□□□□ -0.43
LHX2P50458 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
LHX2P50458 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC12.38□□□□□ -0.43
LHX2P50458 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LHX2P50458 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
LHX2P50458 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LHX2P50458 MRPL55-205ENST00000366731 1423 ntTSL 2 BASIC12.38□□□□□ -0.43
LHX2P50458 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LHX2P50458 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
LHX2P50458 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC12.38□□□□□ -0.43
LHX2P50458 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC12.38□□□□□ -0.43
LHX2P50458 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
LHX2P50458 CATSPERD-202ENST00000381624 2516 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LHX2P50458 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
LHX2P50458 DLG2-205ENST00000398301 2070 ntTSL 2 BASIC12.38□□□□□ -0.43
LHX2P50458 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC12.38□□□□□ -0.43
LHX2P50458 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC12.38□□□□□ -0.43
LHX2P50458 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LHX2P50458 ZDHHC6-201ENST00000369404 1721 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LHX2P50458 MEFV-203ENST00000536379 1713 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
LHX2P50458 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
LHX2P50458 SNRPC-201ENST00000244520 842 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LHX2P50458 MAL-204ENST00000354078 831 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
LHX2P50458 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
LHX2P50458 SEPT7-AS1-201ENST00000412856 587 ntTSL 4 BASIC12.38□□□□□ -0.43
LHX2P50458 AC108734.2-201ENST00000420887 1069 ntBASIC12.38□□□□□ -0.43
LHX2P50458 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LHX2P50458 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC12.38□□□□□ -0.43
LHX2P50458 AL353658.1-201ENST00000436263 789 ntTSL 2 BASIC12.38□□□□□ -0.43
LHX2P50458 DLEU2-205ENST00000443587 705 ntTSL 5 BASIC12.38□□□□□ -0.43
LHX2P50458 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC12.38□□□□□ -0.43
LHX2P50458 ADSSL1-208ENST00000555674 520 ntTSL 3 BASIC12.38□□□□□ -0.43
LHX2P50458 AC074050.2-201ENST00000563338 538 ntTSL 3 BASIC12.38□□□□□ -0.43
LHX2P50458 AC012645.2-201ENST00000566190 553 ntTSL 4 BASIC12.38□□□□□ -0.43
LHX2P50458 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC12.38□□□□□ -0.43
LHX2P50458 PFDN5-220ENST00000628881 231 ntTSL 3 BASIC12.38□□□□□ -0.43
LHX2P50458 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LHX2P50458 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LHX2P50458 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC12.38□□□□□ -0.43
LHX2P50458 PRKACB-205ENST00000370688 1905 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms