Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
MMP13P45452 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
MMP13P45452 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
MMP13P45452 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
MMP13P45452 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC14.54□□□□□ -0.08
MMP13P45452 BIRC5-202ENST00000350051 2630 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
MMP13P45452 H3F3B-201ENST00000254810 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
MMP13P45452 PLPP6-201ENST00000381883 2944 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
MMP13P45452 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
MMP13P45452 KDM2B-215ENST00000542973 3170 ntTSL 2 BASIC14.54□□□□□ -0.08
MMP13P45452 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC14.54□□□□□ -0.08
MMP13P45452 FBXL18-201ENST00000382368 3498 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
MMP13P45452 CADM1-204ENST00000536727 3520 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
MMP13P45452 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
MMP13P45452 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
MMP13P45452 RNA5SP359-201ENST00000364838 113 ntBASIC14.54□□□□□ -0.08
MMP13P45452 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC14.54□□□□□ -0.08
MMP13P45452 AC103592.1-201ENST00000394513 664 ntBASIC14.54□□□□□ -0.08
MMP13P45452 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
MMP13P45452 HMGA1P1-201ENST00000415560 1062 ntBASIC14.54□□□□□ -0.08
MMP13P45452 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC14.54□□□□□ -0.08
MMP13P45452 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC14.54□□□□□ -0.08
MMP13P45452 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
MMP13P45452 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC14.54□□□□□ -0.08
MMP13P45452 AC090857.1-201ENST00000527400 390 ntBASIC14.54□□□□□ -0.08
MMP13P45452 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC14.54□□□□□ -0.08
MMP13P45452 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC14.54□□□□□ -0.08
MMP13P45452 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC14.54□□□□□ -0.08
MMP13P45452 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC14.54□□□□□ -0.08
MMP13P45452 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
MMP13P45452 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
MMP13P45452 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
MMP13P45452 SKA2-205ENST00000580541 689 ntTSL 3 BASIC14.54□□□□□ -0.08
MMP13P45452 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
MMP13P45452 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
MMP13P45452 NDUFV2P1-201ENST00000596415 907 ntBASIC14.54□□□□□ -0.08
MMP13P45452 AL022334.2-201ENST00000610000 484 ntBASIC14.54□□□□□ -0.08
MMP13P45452 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC14.54□□□□□ -0.08
MMP13P45452 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
MMP13P45452 AL590824.1-201ENST00000403828 1349 ntBASIC14.54□□□□□ -0.08
MMP13P45452 EML1-203ENST00000334192 4064 ntTSL 5 BASIC14.54□□□□□ -0.08
MMP13P45452 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
MMP13P45452 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
MMP13P45452 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
MMP13P45452 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
MMP13P45452 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
MMP13P45452 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC14.54□□□□□ -0.08
MMP13P45452 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
MMP13P45452 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
MMP13P45452 TRGV9-201ENST00000444775 1735 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
MMP13P45452 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC14.54□□□□□ -0.08
MMP13P45452 AC007666.1-201ENST00000443935 1838 ntTSL 5 BASIC14.54□□□□□ -0.08
MMP13P45452 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC14.54□□□□□ -0.08
MMP13P45452 HTR3A-201ENST00000299961 1994 ntTSL 2 BASIC14.54□□□□□ -0.08
MMP13P45452 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
MMP13P45452 SIRT2-201ENST00000249396 2070 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
MMP13P45452 SIRT2-204ENST00000392081 2062 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
MMP13P45452 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
MMP13P45452 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
MMP13P45452 FAM200A-202ENST00000449309 2480 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
MMP13P45452 ANXA11-201ENST00000265447 2526 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
MMP13P45452 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
MMP13P45452 ANGPTL2-201ENST00000373417 2575 ntTSL 2 BASIC14.54□□□□□ -0.08
MMP13P45452 TUBGCP4-201ENST00000260383 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
MMP13P45452 SERPINB1-201ENST00000380739 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
MMP13P45452 LPO-203ENST00000421678 2729 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
MMP13P45452 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
MMP13P45452 TBC1D2-204ENST00000375066 3198 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
MMP13P45452 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
MMP13P45452 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
MMP13P45452 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC14.53□□□□□ -0.08
MMP13P45452 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
MMP13P45452 AC004899.2-201ENST00000622993 3860 ntBASIC14.53□□□□□ -0.08
MMP13P45452 ZFAND3-201ENST00000287218 3366 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
MMP13P45452 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
MMP13P45452 ALPP-201ENST00000392027 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
MMP13P45452 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC14.53□□□□□ -0.08
MMP13P45452 DYNC1I2-203ENST00000409197 2572 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
MMP13P45452 DYNC1I2-206ENST00000409773 2583 ntTSL 2 BASIC14.53□□□□□ -0.08
MMP13P45452 TMBIM1-202ENST00000396809 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
MMP13P45452 TBC1D3L-201ENST00000612727 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
MMP13P45452 PI4KAP2-201ENST00000360806 2080 ntBASIC14.53□□□□□ -0.08
MMP13P45452 BCRP2-203ENST00000461808 1832 ntTSL 2 BASIC14.53□□□□□ -0.08
MMP13P45452 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
MMP13P45452 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
MMP13P45452 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
MMP13P45452 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC14.53□□□□□ -0.08
MMP13P45452 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC14.53□□□□□ -0.08
MMP13P45452 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC14.53□□□□□ -0.08
MMP13P45452 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
MMP13P45452 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
MMP13P45452 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC14.53□□□□□ -0.08
MMP13P45452 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
MMP13P45452 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
MMP13P45452 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
MMP13P45452 DEF8-202ENST00000418391 852 ntTSL 2 BASIC14.53□□□□□ -0.08
MMP13P45452 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC14.53□□□□□ -0.08
MMP13P45452 RN7SL530P-201ENST00000485097 298 ntBASIC14.53□□□□□ -0.08
MMP13P45452 RHEB-207ENST00000496004 744 ntTSL 2 BASIC14.53□□□□□ -0.08
MMP13P45452 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms