Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC14.98□□□□□ -0.01
SSR1P43307 TUBB8P8-201ENST00000458717 1058 ntBASIC14.98□□□□□ -0.01
SSR1P43307 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC14.98□□□□□ -0.01
SSR1P43307 RPL18P13-201ENST00000478088 569 ntBASIC14.98□□□□□ -0.01
SSR1P43307 IGHV3-71-201ENST00000523324 359 ntBASIC14.98□□□□□ -0.01
SSR1P43307 AGER-214ENST00000538695 487 ntTSL 2 BASIC14.98□□□□□ -0.01
SSR1P43307 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC14.98□□□□□ -0.01
SSR1P43307 AC003686.1-201ENST00000550956 1034 ntBASIC14.98□□□□□ -0.01
SSR1P43307 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC14.98□□□□□ -0.01
SSR1P43307 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC14.98□□□□□ -0.01
SSR1P43307 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC14.98□□□□□ -0.01
SSR1P43307 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SSR1P43307 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC14.98□□□□□ -0.01
SSR1P43307 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SSR1P43307 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC14.98□□□□□ -0.01
SSR1P43307 CYB5RL-201ENST00000287899 5777 ntTSL 3 BASIC14.98□□□□□ -0.01
SSR1P43307 ZNF318-201ENST00000361428 8006 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
SSR1P43307 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC14.98□□□□□ -0.01
SSR1P43307 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
SSR1P43307 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
SSR1P43307 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
SSR1P43307 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SSR1P43307 TNRC18P1-201ENST00000502875 3650 ntBASIC14.98□□□□□ -0.01
SSR1P43307 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SSR1P43307 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SSR1P43307 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SSR1P43307 KCNN1-201ENST00000222249 3625 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
SSR1P43307 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SSR1P43307 ROBO1-212ENST00000618833 7492 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
SSR1P43307 ROBO1-213ENST00000618846 7483 ntTSL 5 BASIC14.98□□□□□ -0.01
SSR1P43307 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
SSR1P43307 ANKRD36B-201ENST00000258459 5986 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
SSR1P43307 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
SSR1P43307 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC14.97□□□□□ -0.01
SSR1P43307 AC018629.1-201ENST00000623381 1736 ntBASIC14.97□□□□□ -0.01
SSR1P43307 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC14.97□□□□□ -0.01
SSR1P43307 NLGN3-206ENST00000612180 3319 ntTSL 5 BASIC14.97□□□□□ -0.01
SSR1P43307 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC14.97□□□□□ -0.01
SSR1P43307 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SSR1P43307 STK38L-201ENST00000389032 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SSR1P43307 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
SSR1P43307 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
SSR1P43307 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
SSR1P43307 MYO9B-201ENST00000397274 7532 ntTSL 5 BASIC14.97□□□□□ -0.01
SSR1P43307 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SSR1P43307 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SSR1P43307 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
SSR1P43307 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SSR1P43307 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SSR1P43307 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC14.97□□□□□ -0.01
SSR1P43307 ALPP-201ENST00000392027 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SSR1P43307 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
SSR1P43307 BTBD6P1-201ENST00000412176 1267 ntBASIC14.97□□□□□ -0.01
SSR1P43307 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
SSR1P43307 HNRNPA1P63-201ENST00000427917 963 ntBASIC14.97□□□□□ -0.01
SSR1P43307 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
SSR1P43307 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
SSR1P43307 MFF-223ENST00000524634 647 ntTSL 2 BASIC14.97□□□□□ -0.01
SSR1P43307 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC14.97□□□□□ -0.01
SSR1P43307 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SSR1P43307 RN7SL560P-201ENST00000577943 264 ntBASIC14.97□□□□□ -0.01
SSR1P43307 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC14.97□□□□□ -0.01
SSR1P43307 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC14.97□□□□□ -0.01
SSR1P43307 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC14.97□□□□□ -0.01
SSR1P43307 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC14.97□□□□□ -0.01
SSR1P43307 MIR6805-201ENST00000615055 62 ntBASIC14.97□□□□□ -0.01
SSR1P43307 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SSR1P43307 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SSR1P43307 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
SSR1P43307 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SSR1P43307 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
SSR1P43307 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SSR1P43307 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SSR1P43307 AC009093.1-201ENST00000566070 2099 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SSR1P43307 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC14.97□□□□□ -0.01
SSR1P43307 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC14.97□□□□□ -0.01
SSR1P43307 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC14.97□□□□□ -0.01
SSR1P43307 SUN2-201ENST00000405018 4022 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SSR1P43307 PPT1-213ENST00000641319 2388 ntBASIC14.97□□□□□ -0.01
SSR1P43307 PLXNA1-201ENST00000393409 9066 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SSR1P43307 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SSR1P43307 PHF21B-201ENST00000313237 3671 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SSR1P43307 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC14.97□□□□□ -0.01
SSR1P43307 ARHGEF33-201ENST00000398800 4300 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
SSR1P43307 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC14.97□□□□□ -0.01
SSR1P43307 KRT8P29-201ENST00000420409 1371 ntBASIC14.97□□□□□ -0.01
SSR1P43307 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC14.97□□□□□ -0.01
SSR1P43307 SDC3-201ENST00000336798 6392 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SSR1P43307 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SSR1P43307 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
SSR1P43307 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC14.97□□□□□ -0.01
SSR1P43307 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
SSR1P43307 WDR73-202ENST00000434634 5387 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SSR1P43307 SLC4A5-206ENST00000423644 6185 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
SSR1P43307 STOX2-201ENST00000308497 10458 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SSR1P43307 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
SSR1P43307 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
SSR1P43307 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC14.97□□□□□ -0.01
SSR1P43307 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
SSR1P43307 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms