Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 DCAF5-209ENST00000557386 2883 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
KRT9P35527 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC15.32■□□□□ 0.04
KRT9P35527 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
KRT9P35527 PARP3-201ENST00000398755 2336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
KRT9P35527 SARS-201ENST00000234677 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
KRT9P35527 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC15.32■□□□□ 0.04
KRT9P35527 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
KRT9P35527 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
KRT9P35527 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
KRT9P35527 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
KRT9P35527 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
KRT9P35527 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
KRT9P35527 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
KRT9P35527 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
KRT9P35527 KRT18P36-201ENST00000411618 1276 ntBASIC15.32■□□□□ 0.04
KRT9P35527 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
KRT9P35527 AL591846.1-201ENST00000451736 433 ntBASIC15.32■□□□□ 0.04
KRT9P35527 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
KRT9P35527 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC15.32■□□□□ 0.04
KRT9P35527 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC15.32■□□□□ 0.04
KRT9P35527 FAM8A2P-201ENST00000528813 1142 ntBASIC15.32■□□□□ 0.04
KRT9P35527 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC15.32■□□□□ 0.04
KRT9P35527 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC15.32■□□□□ 0.04
KRT9P35527 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC15.32■□□□□ 0.04
KRT9P35527 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC15.32■□□□□ 0.04
KRT9P35527 BNIP3P13-201ENST00000599968 566 ntBASIC15.32■□□□□ 0.04
KRT9P35527 AL359881.2-201ENST00000602973 570 ntBASIC15.32■□□□□ 0.04
KRT9P35527 AP000346.4-201ENST00000614827 381 ntBASIC15.32■□□□□ 0.04
KRT9P35527 NPAS4-201ENST00000311034 3303 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
KRT9P35527 LRRC17-201ENST00000249377 2002 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
KRT9P35527 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
KRT9P35527 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
KRT9P35527 Z98257.2-202ENST00000641138 1548 ntBASIC15.32■□□□□ 0.04
KRT9P35527 RIMS1-218ENST00000522291 3876 ntTSL 5 BASIC15.32■□□□□ 0.04
KRT9P35527 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
KRT9P35527 AP1B1-202ENST00000357586 4176 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
KRT9P35527 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
KRT9P35527 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC15.32■□□□□ 0.04
KRT9P35527 MARK2P16-201ENST00000605714 1723 ntBASIC15.31■□□□□ 0.04
KRT9P35527 NT5DC4-201ENST00000327581 1767 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
KRT9P35527 AC002350.2-201ENST00000623894 1828 ntBASIC15.31■□□□□ 0.04
KRT9P35527 CDH8-201ENST00000299345 3728 ntTSL 5 BASIC15.31■□□□□ 0.04
KRT9P35527 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
KRT9P35527 DSN1-201ENST00000373734 1915 ntTSL 2 BASIC15.31■□□□□ 0.04
KRT9P35527 DYNC1I1-201ENST00000324972 2950 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
KRT9P35527 CPEB1-213ENST00000617462 2068 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
KRT9P35527 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
KRT9P35527 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
KRT9P35527 NDRG4-236ENST00000566192 3265 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
KRT9P35527 ZCCHC12-201ENST00000310164 2231 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
KRT9P35527 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC15.31■□□□□ 0.04
KRT9P35527 B4GALT4-201ENST00000359213 2385 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
KRT9P35527 SMS-201ENST00000379404 1174 ntTSL 3 BASIC15.31■□□□□ 0.04
KRT9P35527 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
KRT9P35527 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC15.31■□□□□ 0.04
KRT9P35527 OR2R1P-201ENST00000441404 914 ntBASIC15.31■□□□□ 0.04
KRT9P35527 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC15.31■□□□□ 0.04
KRT9P35527 APOA2-204ENST00000464492 530 ntTSL 3 BASIC15.31■□□□□ 0.04
KRT9P35527 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
KRT9P35527 PUDP-206ENST00000540122 825 ntTSL 2 BASIC15.31■□□□□ 0.04
KRT9P35527 RN7SL163P-201ENST00000583100 276 ntBASIC15.31■□□□□ 0.04
KRT9P35527 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC15.31■□□□□ 0.04
KRT9P35527 AC091271.1-201ENST00000611877 1162 ntBASIC15.31■□□□□ 0.04
KRT9P35527 PCBP2-OT1-201ENST00000634357 590 ntBASIC15.31■□□□□ 0.04
KRT9P35527 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC15.31■□□□□ 0.04
KRT9P35527 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC15.31■□□□□ 0.04
KRT9P35527 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
KRT9P35527 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
KRT9P35527 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
KRT9P35527 EPN2-205ENST00000395626 2863 ntTSL 2 BASIC15.31■□□□□ 0.04
KRT9P35527 ZCCHC18-206ENST00000611638 2941 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
KRT9P35527 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
KRT9P35527 AP002353.1-201ENST00000528257 1599 ntBASIC15.31■□□□□ 0.04
KRT9P35527 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC15.31■□□□□ 0.04
KRT9P35527 NCS1-201ENST00000372398 4991 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
KRT9P35527 ACVR1B-202ENST00000415850 1665 ntTSL 2 BASIC15.31■□□□□ 0.04
KRT9P35527 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC15.31■□□□□ 0.04
KRT9P35527 WASHC1-201ENST00000442898 1827 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
KRT9P35527 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC15.31■□□□□ 0.04
KRT9P35527 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
KRT9P35527 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
KRT9P35527 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
KRT9P35527 MANEA-AS1-201ENST00000564541 2268 ntBASIC15.31■□□□□ 0.04
KRT9P35527 AC036108.2-201ENST00000566974 2562 ntTSL 2 BASIC15.31■□□□□ 0.04
KRT9P35527 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
KRT9P35527 LINC01679-201ENST00000442815 2798 ntTSL 3 BASIC15.3■□□□□ 0.04
KRT9P35527 HERPUD1-204ENST00000439977 2946 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
KRT9P35527 SEZ6L-201ENST00000248933 3248 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
KRT9P35527 SEZ6L-210ENST00000629590 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
KRT9P35527 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
KRT9P35527 DYRK4-201ENST00000010132 1840 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
KRT9P35527 CDK2-201ENST00000266970 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
KRT9P35527 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
KRT9P35527 SPOUT1-201ENST00000361256 4286 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
KRT9P35527 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
KRT9P35527 FAM90A7P-201ENST00000382628 1395 ntBASIC15.3■□□□□ 0.04
KRT9P35527 FAM90A23P-201ENST00000400136 1395 ntBASIC15.3■□□□□ 0.04
KRT9P35527 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC15.3■□□□□ 0.04
KRT9P35527 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC15.3■□□□□ 0.04
KRT9P35527 RPS2P32-201ENST00000439199 892 ntBASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms