Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC11.44□□□□□ -0.58
DEFA4P12838 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
DEFA4P12838 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC11.44□□□□□ -0.58
DEFA4P12838 C2orf69P2-201ENST00000562032 1123 ntBASIC11.44□□□□□ -0.58
DEFA4P12838 AC100827.2-201ENST00000563214 1194 ntBASIC11.44□□□□□ -0.58
DEFA4P12838 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC11.44□□□□□ -0.58
DEFA4P12838 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC11.44□□□□□ -0.58
DEFA4P12838 AC106886.1-201ENST00000568660 600 ntBASIC11.44□□□□□ -0.58
DEFA4P12838 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC11.44□□□□□ -0.58
DEFA4P12838 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC11.44□□□□□ -0.58
DEFA4P12838 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
DEFA4P12838 AC021016.3-201ENST00000608367 477 ntBASIC11.44□□□□□ -0.58
DEFA4P12838 MIR6720-201ENST00000611664 98 ntBASIC11.44□□□□□ -0.58
DEFA4P12838 RPS24-214ENST00000613865 538 ntTSL 5 BASIC11.44□□□□□ -0.58
DEFA4P12838 AL162274.1-201ENST00000617191 1098 ntBASIC11.44□□□□□ -0.58
DEFA4P12838 COL3A1-201ENST00000304636 5543 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
DEFA4P12838 SH2D5-201ENST00000375031 3705 ntTSL 2 BASIC11.44□□□□□ -0.58
DEFA4P12838 CCT6P3-201ENST00000419314 3702 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
DEFA4P12838 ZNF419-202ENST00000347466 3654 ntAPPRIS P3 TSL 2 BASIC11.44□□□□□ -0.58
DEFA4P12838 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
DEFA4P12838 MECOM-206ENST00000464456 5732 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
DEFA4P12838 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
DEFA4P12838 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
DEFA4P12838 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
DEFA4P12838 TRPM5-202ENST00000528453 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
DEFA4P12838 GFRA1-204ENST00000439649 9216 ntAPPRIS P3 TSL 2 BASIC11.44□□□□□ -0.58
DEFA4P12838 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
DEFA4P12838 PCDHGA8-202ENST00000610569 6480 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
DEFA4P12838 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
DEFA4P12838 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
DEFA4P12838 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
DEFA4P12838 GRM4-202ENST00000374181 7275 ntTSL 5 BASIC11.44□□□□□ -0.58
DEFA4P12838 CLPX-201ENST00000300107 4695 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
DEFA4P12838 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
DEFA4P12838 CAMKK2-204ENST00000392473 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
DEFA4P12838 EMBP1-203ENST00000622787 4235 ntTSL 2 BASIC11.43□□□□□ -0.58
DEFA4P12838 MTHFR-202ENST00000376583 7044 ntAPPRIS ALT1 TSL 5 BASIC11.43□□□□□ -0.58
DEFA4P12838 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
DEFA4P12838 ABCA3-201ENST00000301732 6609 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
DEFA4P12838 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
DEFA4P12838 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
DEFA4P12838 AL445250.1-201ENST00000641671 2259 ntBASIC11.43□□□□□ -0.58
DEFA4P12838 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
DEFA4P12838 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC11.43□□□□□ -0.58
DEFA4P12838 TMEM104-204ENST00000582330 4679 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
DEFA4P12838 GOSR2-233ENST00000640068 3103 ntTSL 5 BASIC11.43□□□□□ -0.58
DEFA4P12838 PAX8-203ENST00000348715 3966 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
DEFA4P12838 ATXN2L-205ENST00000395547 3981 ntAPPRIS P4 TSL 1 (best) BASIC11.43□□□□□ -0.58
DEFA4P12838 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
DEFA4P12838 TEX35-204ENST00000367642 2452 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
DEFA4P12838 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
DEFA4P12838 TP53INP2-202ENST00000374810 4184 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
DEFA4P12838 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
DEFA4P12838 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
DEFA4P12838 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC11.43□□□□□ -0.58
DEFA4P12838 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC11.43□□□□□ -0.58
DEFA4P12838 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC11.43□□□□□ -0.58
DEFA4P12838 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC11.43□□□□□ -0.58
DEFA4P12838 FAM58BP-201ENST00000439056 645 ntBASIC11.43□□□□□ -0.58
DEFA4P12838 YBX1P6-201ENST00000442962 1002 ntBASIC11.43□□□□□ -0.58
DEFA4P12838 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC11.43□□□□□ -0.58
DEFA4P12838 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC11.43□□□□□ -0.58
DEFA4P12838 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC11.43□□□□□ -0.58
DEFA4P12838 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC11.43□□□□□ -0.58
DEFA4P12838 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC11.43□□□□□ -0.58
DEFA4P12838 KLK3-207ENST00000595952 969 ntTSL 3 BASIC11.43□□□□□ -0.58
DEFA4P12838 AC132192.2-201ENST00000596206 1147 ntBASIC11.43□□□□□ -0.58
DEFA4P12838 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC11.43□□□□□ -0.58
DEFA4P12838 LINC02084-201ENST00000606069 1096 ntBASIC11.43□□□□□ -0.58
DEFA4P12838 FLT4-212ENST00000619105 3806 ntTSL 5 BASIC11.43□□□□□ -0.58
DEFA4P12838 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
DEFA4P12838 AC008687.7-202ENST00000637404 953 ntBASIC11.43□□□□□ -0.58
DEFA4P12838 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC11.43□□□□□ -0.58
DEFA4P12838 CACNA1F-203ENST00000376265 6070 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
DEFA4P12838 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
DEFA4P12838 AP000437.1-201ENST00000624057 2085 ntBASIC11.43□□□□□ -0.58
DEFA4P12838 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
DEFA4P12838 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC11.43□□□□□ -0.58
DEFA4P12838 DHX30-201ENST00000348968 3994 ntTSL 5 BASIC11.43□□□□□ -0.58
DEFA4P12838 NLRP2-202ENST00000339757 3422 ntAPPRIS ALT2 TSL 2 BASIC11.43□□□□□ -0.58
DEFA4P12838 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC11.43□□□□□ -0.58
DEFA4P12838 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
DEFA4P12838 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC11.43□□□□□ -0.58
DEFA4P12838 MALL-201ENST00000272462 3061 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
DEFA4P12838 FAS-202ENST00000352159 1722 ntTSL 5 BASIC11.43□□□□□ -0.58
DEFA4P12838 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
DEFA4P12838 RBM12B-201ENST00000399300 7269 ntAPPRIS P2 TSL 2 BASIC11.43□□□□□ -0.58
DEFA4P12838 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
DEFA4P12838 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
DEFA4P12838 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC11.43□□□□□ -0.58
DEFA4P12838 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
DEFA4P12838 EWSAT1-201ENST00000415504 2214 ntTSL 2 BASIC11.43□□□□□ -0.58
DEFA4P12838 NFATC1-203ENST00000329101 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
DEFA4P12838 E2F3P2-201ENST00000447755 1422 ntBASIC11.43□□□□□ -0.58
DEFA4P12838 COL1A2-213ENST00000620463 4523 ntTSL 5 BASIC11.43□□□□□ -0.58
DEFA4P12838 PRDM16-208ENST00000514189 4236 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
DEFA4P12838 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
DEFA4P12838 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
DEFA4P12838 PCDHB19P-202ENST00000625133 2914 ntBASIC11.42□□□□□ -0.58
DEFA4P12838 DCAF6-201ENST00000312263 3186 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms