Protein–RNA interactions for Protein: P12644

BMP4, Bone morphogenetic protein 4, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4P12644 SECISBP2-201ENST00000339901 3320 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
BMP4P12644 KIF3A-208ENST00000618515 3333 ntTSL 5 BASIC12.93□□□□□ -0.34
BMP4P12644 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
BMP4P12644 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
BMP4P12644 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
BMP4P12644 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
BMP4P12644 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC12.93□□□□□ -0.34
BMP4P12644 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
BMP4P12644 AL928654.5-201ENST00000624831 2501 ntBASIC12.93□□□□□ -0.34
BMP4P12644 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC12.93□□□□□ -0.34
BMP4P12644 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC12.93□□□□□ -0.34
BMP4P12644 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC12.93□□□□□ -0.34
BMP4P12644 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
BMP4P12644 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
BMP4P12644 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
BMP4P12644 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
BMP4P12644 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
BMP4P12644 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
BMP4P12644 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC12.93□□□□□ -0.34
BMP4P12644 OLR1-203ENST00000432556 950 ntTSL 2 BASIC12.93□□□□□ -0.34
BMP4P12644 AC003958.1-201ENST00000435883 421 ntBASIC12.93□□□□□ -0.34
BMP4P12644 AC006033.1-201ENST00000440505 426 ntBASIC12.93□□□□□ -0.34
BMP4P12644 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC12.93□□□□□ -0.34
BMP4P12644 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
BMP4P12644 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
BMP4P12644 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC12.93□□□□□ -0.34
BMP4P12644 FTLP10-202ENST00000505798 471 ntBASIC12.93□□□□□ -0.34
BMP4P12644 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
BMP4P12644 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC12.93□□□□□ -0.34
BMP4P12644 CD74-212ENST00000524315 584 ntTSL 5 BASIC12.93□□□□□ -0.34
BMP4P12644 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
BMP4P12644 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
BMP4P12644 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC12.93□□□□□ -0.34
BMP4P12644 HNRNPA1P48-202ENST00000565308 961 ntBASIC12.93□□□□□ -0.34
BMP4P12644 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
BMP4P12644 AL118558.3-201ENST00000607414 1079 ntBASIC12.93□□□□□ -0.34
BMP4P12644 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC12.93□□□□□ -0.34
BMP4P12644 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC12.93□□□□□ -0.34
BMP4P12644 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
BMP4P12644 KCNMA1-216ENST00000457953 3976 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
BMP4P12644 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
BMP4P12644 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC12.93□□□□□ -0.34
BMP4P12644 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
BMP4P12644 AC026992.2-203ENST00000563004 2419 ntBASIC12.93□□□□□ -0.34
BMP4P12644 TCF12-201ENST00000267811 6061 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
BMP4P12644 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC12.93□□□□□ -0.34
BMP4P12644 NRP2-202ENST00000357118 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
BMP4P12644 ST5-256ENST00000534127 4545 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
BMP4P12644 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
BMP4P12644 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
BMP4P12644 FGFR1-207ENST00000397103 2953 ntTSL 5 BASIC12.93□□□□□ -0.34
BMP4P12644 TRPM5-201ENST00000155858 3929 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
BMP4P12644 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
BMP4P12644 ARAF-203ENST00000377045 2458 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
BMP4P12644 PCID2-205ENST00000375477 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
BMP4P12644 SLC28A1-201ENST00000286749 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
BMP4P12644 AC007666.1-201ENST00000443935 1838 ntTSL 5 BASIC12.92□□□□□ -0.34
BMP4P12644 ZNF197-204ENST00000383745 2935 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
BMP4P12644 MARCH10-201ENST00000311269 3090 ntAPPRIS P3 TSL 2 BASIC12.92□□□□□ -0.34
BMP4P12644 XRCC6-201ENST00000359308 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
BMP4P12644 IL10-202ENST00000423557 1630 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
BMP4P12644 HOXB13-201ENST00000290295 3467 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
BMP4P12644 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC12.92□□□□□ -0.34
BMP4P12644 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
BMP4P12644 IFT172-202ENST00000359466 2207 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
BMP4P12644 DNMT3B-205ENST00000443239 2674 ntTSL 2 BASIC12.92□□□□□ -0.34
BMP4P12644 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC12.92□□□□□ -0.34
BMP4P12644 HLA-E-201ENST00000376630 2601 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
BMP4P12644 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
BMP4P12644 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC12.92□□□□□ -0.34
BMP4P12644 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC12.92□□□□□ -0.34
BMP4P12644 PTPA-218ENST00000435132 618 ntTSL 2 BASIC12.92□□□□□ -0.34
BMP4P12644 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC12.92□□□□□ -0.34
BMP4P12644 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC12.92□□□□□ -0.34
BMP4P12644 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
BMP4P12644 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
BMP4P12644 EMC4-209ENST00000559421 497 ntTSL 2 BASIC12.92□□□□□ -0.34
BMP4P12644 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC12.92□□□□□ -0.34
BMP4P12644 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
BMP4P12644 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC12.92□□□□□ -0.34
BMP4P12644 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC12.92□□□□□ -0.34
BMP4P12644 AC244093.1-201ENST00000610837 814 ntBASIC12.92□□□□□ -0.34
BMP4P12644 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
BMP4P12644 GFRA2-202ENST00000517328 2104 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
BMP4P12644 TBC1D3L-201ENST00000612727 2148 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
BMP4P12644 CDH8-201ENST00000299345 3728 ntTSL 5 BASIC12.92□□□□□ -0.34
BMP4P12644 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
BMP4P12644 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
BMP4P12644 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
BMP4P12644 MKX-201ENST00000375790 3846 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
BMP4P12644 LINC00638-201ENST00000555578 2518 ntBASIC12.92□□□□□ -0.34
BMP4P12644 APLP2-202ENST00000278756 3687 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
BMP4P12644 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
BMP4P12644 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
BMP4P12644 ACSM2B-201ENST00000329697 2935 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
BMP4P12644 TNFSF8-201ENST00000223795 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
BMP4P12644 AP1B1-202ENST00000357586 4176 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
BMP4P12644 NDRG4-201ENST00000258187 3324 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
BMP4P12644 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC12.91□□□□□ -0.34
BMP4P12644 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms