Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
APOA4P06727 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC14.04□□□□□ -0.16
APOA4P06727 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
APOA4P06727 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
APOA4P06727 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
APOA4P06727 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
APOA4P06727 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
APOA4P06727 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
APOA4P06727 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC14.04□□□□□ -0.16
APOA4P06727 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
APOA4P06727 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
APOA4P06727 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
APOA4P06727 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
APOA4P06727 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
APOA4P06727 SLC16A6P1-201ENST00000413214 1059 ntBASIC14.04□□□□□ -0.16
APOA4P06727 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC14.04□□□□□ -0.16
APOA4P06727 SCARNA20.5-201ENST00000516991 142 ntBASIC14.04□□□□□ -0.16
APOA4P06727 PACS1-203ENST00000524815 628 ntTSL 4 BASIC14.04□□□□□ -0.16
APOA4P06727 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC14.04□□□□□ -0.16
APOA4P06727 MAX-218ENST00000557746 571 ntTSL 4 BASIC14.04□□□□□ -0.16
APOA4P06727 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC14.04□□□□□ -0.16
APOA4P06727 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
APOA4P06727 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC14.04□□□□□ -0.16
APOA4P06727 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
APOA4P06727 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
APOA4P06727 MIR6799-201ENST00000620297 69 ntBASIC14.04□□□□□ -0.16
APOA4P06727 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
APOA4P06727 GCOM1-214ENST00000587652 2329 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
APOA4P06727 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
APOA4P06727 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
APOA4P06727 PRKAR1A-203ENST00000392711 4327 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
APOA4P06727 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC14.04□□□□□ -0.16
APOA4P06727 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
APOA4P06727 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
APOA4P06727 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC14.04□□□□□ -0.16
APOA4P06727 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
APOA4P06727 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC14.04□□□□□ -0.16
APOA4P06727 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
APOA4P06727 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
APOA4P06727 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC14.04□□□□□ -0.16
APOA4P06727 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
APOA4P06727 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
APOA4P06727 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC14.04□□□□□ -0.16
APOA4P06727 AC020917.4-201ENST00000623994 1999 ntBASIC14.03□□□□□ -0.16
APOA4P06727 TSN-212ENST00000536142 3328 ntTSL 2 BASIC14.03□□□□□ -0.16
APOA4P06727 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC14.03□□□□□ -0.16
APOA4P06727 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
APOA4P06727 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC14.03□□□□□ -0.16
APOA4P06727 AC073862.5-201ENST00000624129 2027 ntBASIC14.03□□□□□ -0.16
APOA4P06727 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC14.03□□□□□ -0.16
APOA4P06727 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
APOA4P06727 KCNMA1-291ENST00000640834 3664 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
APOA4P06727 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
APOA4P06727 PPP1R8-202ENST00000311772 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
APOA4P06727 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
APOA4P06727 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
APOA4P06727 ZNF568-206ENST00000455427 2378 ntTSL 2 BASIC14.03□□□□□ -0.16
APOA4P06727 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
APOA4P06727 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
APOA4P06727 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC14.03□□□□□ -0.16
APOA4P06727 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
APOA4P06727 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
APOA4P06727 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC14.03□□□□□ -0.16
APOA4P06727 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC14.03□□□□□ -0.16
APOA4P06727 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
APOA4P06727 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
APOA4P06727 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
APOA4P06727 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
APOA4P06727 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
APOA4P06727 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
APOA4P06727 MIR1247-201ENST00000408206 136 ntBASIC14.03□□□□□ -0.16
APOA4P06727 AC016700.1-201ENST00000429424 312 ntBASIC14.03□□□□□ -0.16
APOA4P06727 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC14.03□□□□□ -0.16
APOA4P06727 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC14.03□□□□□ -0.16
APOA4P06727 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC14.03□□□□□ -0.16
APOA4P06727 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC14.03□□□□□ -0.16
APOA4P06727 RN7SL277P-201ENST00000481521 288 ntBASIC14.03□□□□□ -0.16
APOA4P06727 RN7SL530P-201ENST00000485097 298 ntBASIC14.03□□□□□ -0.16
APOA4P06727 RHEB-207ENST00000496004 744 ntTSL 2 BASIC14.03□□□□□ -0.16
APOA4P06727 AC090857.1-201ENST00000527400 390 ntBASIC14.03□□□□□ -0.16
APOA4P06727 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
APOA4P06727 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC14.03□□□□□ -0.16
APOA4P06727 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC14.03□□□□□ -0.16
APOA4P06727 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC14.03□□□□□ -0.16
APOA4P06727 AL645939.5-201ENST00000606834 243 ntBASIC14.03□□□□□ -0.16
APOA4P06727 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
APOA4P06727 LINC00115-201ENST00000473798 1317 ntBASIC14.03□□□□□ -0.16
APOA4P06727 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
APOA4P06727 WDFY2-203ENST00000612477 6932 ntTSL 2 BASIC14.03□□□□□ -0.16
APOA4P06727 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
APOA4P06727 C19orf12-209ENST00000623113 4242 ntTSL 2 BASIC14.03□□□□□ -0.16
APOA4P06727 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC14.03□□□□□ -0.16
APOA4P06727 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC14.03□□□□□ -0.16
APOA4P06727 AC138028.6-201ENST00000616106 1482 ntBASIC14.03□□□□□ -0.16
APOA4P06727 Z98257.2-202ENST00000641138 1548 ntBASIC14.03□□□□□ -0.16
APOA4P06727 AL157791.1-201ENST00000553667 1699 ntBASIC14.03□□□□□ -0.16
APOA4P06727 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
APOA4P06727 AC004623.1-201ENST00000624592 2127 ntBASIC14.03□□□□□ -0.16
APOA4P06727 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC14.03□□□□□ -0.16
APOA4P06727 PLAT-203ENST00000429089 2599 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms