Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 AC018755.1-201ENST00000601315 1182 ntBASIC5.96□□□□□ -1.46
USH2AO75445 AL596094.1-201ENST00000608273 276 ntTSL 2 BASIC5.96□□□□□ -1.46
USH2AO75445 AC092471.2-201ENST00000637219 651 ntBASIC5.96□□□□□ -1.46
USH2AO75445 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
USH2AO75445 ATF4P4-201ENST00000393544 1930 ntBASIC5.96□□□□□ -1.46
USH2AO75445 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
USH2AO75445 ZDHHC8P1-202ENST00000418264 1403 ntBASIC5.96□□□□□ -1.46
USH2AO75445 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC5.96□□□□□ -1.46
USH2AO75445 SPAG8-202ENST00000396638 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
USH2AO75445 RAB30-201ENST00000260056 1393 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
USH2AO75445 SLC7A8-214ENST00000621729 1371 ntTSL 5 BASIC5.96□□□□□ -1.46
USH2AO75445 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
USH2AO75445 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC5.96□□□□□ -1.46
USH2AO75445 GOLGA8N-205ENST00000569659 1791 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
USH2AO75445 NTM-201ENST00000374784 1315 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
USH2AO75445 TBC1D21-201ENST00000300504 1207 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
USH2AO75445 SLC25A5-201ENST00000317881 1274 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
USH2AO75445 OR2T34-201ENST00000328782 957 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
USH2AO75445 OR2T3-201ENST00000359594 957 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
USH2AO75445 AL390726.1-201ENST00000451357 202 ntBASIC5.96□□□□□ -1.46
USH2AO75445 AP000926.2-201ENST00000469983 358 ntBASIC5.96□□□□□ -1.46
USH2AO75445 ZNF548-207ENST00000597400 589 ntTSL 3 BASIC5.96□□□□□ -1.46
USH2AO75445 PROX1-AS1-205ENST00000598091 720 ntTSL 5 BASIC5.96□□□□□ -1.46
USH2AO75445 AC022392.1-201ENST00000609403 744 ntBASIC5.96□□□□□ -1.46
USH2AO75445 AC090093.1-201ENST00000611315 271 ntBASIC5.96□□□□□ -1.46
USH2AO75445 MAP3K14-205ENST00000617331 1049 ntTSL 5 BASIC5.96□□□□□ -1.46
USH2AO75445 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC5.96□□□□□ -1.46
USH2AO75445 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
USH2AO75445 AC025538.1-201ENST00000510707 1486 ntBASIC5.96□□□□□ -1.46
USH2AO75445 SKAP1-208ENST00000584924 1477 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
USH2AO75445 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC5.96□□□□□ -1.46
USH2AO75445 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
USH2AO75445 CHRNA1-208ENST00000636168 1862 ntTSL 5 BASIC5.96□□□□□ -1.46
USH2AO75445 TRIML2-207ENST00000512729 1639 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
USH2AO75445 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC5.96□□□□□ -1.46
USH2AO75445 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
USH2AO75445 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC5.96□□□□□ -1.46
USH2AO75445 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
USH2AO75445 UPF3B-204ENST00000619445 1385 ntTSL 5 BASIC5.96□□□□□ -1.46
USH2AO75445 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC5.96□□□□□ -1.46
USH2AO75445 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
USH2AO75445 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
USH2AO75445 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
USH2AO75445 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC5.96□□□□□ -1.46
USH2AO75445 AL807752.1-201ENST00000395082 1322 ntBASIC5.96□□□□□ -1.46
USH2AO75445 AP001267.2-201ENST00000532619 2086 ntBASIC5.96□□□□□ -1.46
USH2AO75445 LINC02154-201ENST00000412485 1497 ntTSL 2 BASIC5.96□□□□□ -1.46
USH2AO75445 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC5.96□□□□□ -1.46
USH2AO75445 SUCLG2P2-201ENST00000307241 1296 ntBASIC5.96□□□□□ -1.46
USH2AO75445 SPANXD-201ENST00000370515 682 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
USH2AO75445 AC007312.1-201ENST00000427493 258 ntBASIC5.96□□□□□ -1.46
USH2AO75445 AL139220.1-201ENST00000436802 520 ntBASIC5.96□□□□□ -1.46
USH2AO75445 RN7SL833P-201ENST00000498758 284 ntBASIC5.96□□□□□ -1.46
USH2AO75445 AC002519.2-201ENST00000563575 539 ntTSL 4 BASIC5.96□□□□□ -1.46
USH2AO75445 AC211476.2-201ENST00000608799 708 ntBASIC5.96□□□□□ -1.46
USH2AO75445 PCGF2-205ENST00000618506 1196 ntTSL 5 BASIC5.96□□□□□ -1.46
USH2AO75445 AC012313.9-201ENST00000619318 633 ntBASIC5.96□□□□□ -1.46
USH2AO75445 AL354702.1-201ENST00000442006 1960 ntBASIC5.96□□□□□ -1.46
USH2AO75445 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC5.96□□□□□ -1.46
USH2AO75445 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC5.96□□□□□ -1.46
USH2AO75445 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC5.96□□□□□ -1.46
USH2AO75445 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC5.96□□□□□ -1.46
USH2AO75445 CD1A-201ENST00000289429 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
USH2AO75445 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC5.96□□□□□ -1.46
USH2AO75445 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC5.96□□□□□ -1.46
USH2AO75445 OXNAD1-206ENST00000605932 1681 ntAPPRIS P2 TSL 1 (best) BASIC5.96□□□□□ -1.46
USH2AO75445 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
USH2AO75445 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC5.95□□□□□ -1.46
USH2AO75445 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
USH2AO75445 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
USH2AO75445 CUL4A-204ENST00000451881 3724 ntTSL 5 BASIC5.95□□□□□ -1.46
USH2AO75445 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC5.95□□□□□ -1.46
USH2AO75445 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
USH2AO75445 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
USH2AO75445 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
USH2AO75445 AC005037.1-202ENST00000332935 820 ntTSL 3 BASIC5.95□□□□□ -1.46
USH2AO75445 SCGB1C1-201ENST00000342878 431 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
USH2AO75445 AC018511.1-201ENST00000436608 380 ntTSL 5 BASIC5.95□□□□□ -1.46
USH2AO75445 CLDN16-202ENST00000456423 430 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
USH2AO75445 RN7SL105P-201ENST00000475661 299 ntBASIC5.95□□□□□ -1.46
USH2AO75445 RN7SL559P-201ENST00000476501 297 ntBASIC5.95□□□□□ -1.46
USH2AO75445 HNRNPA1P4-201ENST00000509706 756 ntBASIC5.95□□□□□ -1.46
USH2AO75445 GINS4-203ENST00000518671 1158 ntAPPRIS P1 TSL 3 BASIC5.95□□□□□ -1.46
USH2AO75445 AC103736.1-201ENST00000524410 605 ntTSL 3 BASIC5.95□□□□□ -1.46
USH2AO75445 ACAP1-204ENST00000570504 274 ntTSL 3 BASIC5.95□□□□□ -1.46
USH2AO75445 NPLOC4-214ENST00000573876 560 ntTSL 4 BASIC5.95□□□□□ -1.46
USH2AO75445 AC004832.1-204ENST00000610737 1018 ntTSL 5 BASIC5.95□□□□□ -1.46
USH2AO75445 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC5.95□□□□□ -1.46
USH2AO75445 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
USH2AO75445 PDXDC1-218ENST00000627450 2683 ntTSL 2 BASIC5.95□□□□□ -1.46
USH2AO75445 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
USH2AO75445 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC5.95□□□□□ -1.46
USH2AO75445 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC5.95□□□□□ -1.46
USH2AO75445 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
USH2AO75445 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC5.95□□□□□ -1.46
USH2AO75445 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
USH2AO75445 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
USH2AO75445 PITPNB-201ENST00000320996 2826 ntAPPRIS ALT1 TSL 1 (best) BASIC5.95□□□□□ -1.46
USH2AO75445 AC018442.1-201ENST00000421439 2061 ntBASIC5.95□□□□□ -1.46
USH2AO75445 ERCC4-207ENST00000575156 2073 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms