Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
HCFC2Q9Y5Z7 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
HCFC2Q9Y5Z7 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC23.7■■□□□ 1.38
HCFC2Q9Y5Z7 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC23.7■■□□□ 1.38
HCFC2Q9Y5Z7 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
HCFC2Q9Y5Z7 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
HCFC2Q9Y5Z7 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
HCFC2Q9Y5Z7 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
HCFC2Q9Y5Z7 AC010525.1-201ENST00000585559 441 ntBASIC23.69■■□□□ 1.38
HCFC2Q9Y5Z7 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC23.69■■□□□ 1.38
HCFC2Q9Y5Z7 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC23.69■■□□□ 1.38
HCFC2Q9Y5Z7 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC23.69■■□□□ 1.38
HCFC2Q9Y5Z7 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
HCFC2Q9Y5Z7 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
HCFC2Q9Y5Z7 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
HCFC2Q9Y5Z7 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
HCFC2Q9Y5Z7 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
HCFC2Q9Y5Z7 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
HCFC2Q9Y5Z7 VPS53-216ENST00000574029 585 ntTSL 4 BASIC23.68■■□□□ 1.38
HCFC2Q9Y5Z7 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC23.68■■□□□ 1.38
HCFC2Q9Y5Z7 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
HCFC2Q9Y5Z7 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC23.68■■□□□ 1.38
HCFC2Q9Y5Z7 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC23.68■■□□□ 1.38
HCFC2Q9Y5Z7 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
HCFC2Q9Y5Z7 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC23.68■■□□□ 1.38
HCFC2Q9Y5Z7 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
HCFC2Q9Y5Z7 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
HCFC2Q9Y5Z7 LINC02228-203ENST00000641970 1355 ntBASIC23.67■■□□□ 1.38
HCFC2Q9Y5Z7 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC23.67■■□□□ 1.38
HCFC2Q9Y5Z7 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
HCFC2Q9Y5Z7 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC23.67■■□□□ 1.38
HCFC2Q9Y5Z7 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
HCFC2Q9Y5Z7 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC23.67■■□□□ 1.38
HCFC2Q9Y5Z7 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
HCFC2Q9Y5Z7 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
HCFC2Q9Y5Z7 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
HCFC2Q9Y5Z7 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
HCFC2Q9Y5Z7 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC23.66■■□□□ 1.38
HCFC2Q9Y5Z7 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
HCFC2Q9Y5Z7 OR2I1P-207ENST00000453522 948 ntBASIC23.66■■□□□ 1.38
HCFC2Q9Y5Z7 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
HCFC2Q9Y5Z7 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC23.66■■□□□ 1.38
HCFC2Q9Y5Z7 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC23.66■■□□□ 1.38
HCFC2Q9Y5Z7 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC23.66■■□□□ 1.38
HCFC2Q9Y5Z7 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC23.66■■□□□ 1.38
HCFC2Q9Y5Z7 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
HCFC2Q9Y5Z7 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
HCFC2Q9Y5Z7 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
HCFC2Q9Y5Z7 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC23.65■■□□□ 1.38
HCFC2Q9Y5Z7 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC23.65■■□□□ 1.38
HCFC2Q9Y5Z7 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
HCFC2Q9Y5Z7 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC23.65■■□□□ 1.38
HCFC2Q9Y5Z7 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC23.65■■□□□ 1.38
HCFC2Q9Y5Z7 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
HCFC2Q9Y5Z7 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
HCFC2Q9Y5Z7 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
HCFC2Q9Y5Z7 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC23.64■■□□□ 1.38
HCFC2Q9Y5Z7 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
HCFC2Q9Y5Z7 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
HCFC2Q9Y5Z7 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
HCFC2Q9Y5Z7 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC23.64■■□□□ 1.38
HCFC2Q9Y5Z7 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
HCFC2Q9Y5Z7 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.37
HCFC2Q9Y5Z7 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC23.64■■□□□ 1.37
HCFC2Q9Y5Z7 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.37
HCFC2Q9Y5Z7 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC23.64■■□□□ 1.37
HCFC2Q9Y5Z7 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
HCFC2Q9Y5Z7 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
HCFC2Q9Y5Z7 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
HCFC2Q9Y5Z7 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
HCFC2Q9Y5Z7 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
HCFC2Q9Y5Z7 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
HCFC2Q9Y5Z7 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
HCFC2Q9Y5Z7 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
HCFC2Q9Y5Z7 ME3-201ENST00000323418 1068 ntTSL 5 BASIC23.63■■□□□ 1.37
HCFC2Q9Y5Z7 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
HCFC2Q9Y5Z7 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
HCFC2Q9Y5Z7 LHPP-203ENST00000392757 840 ntTSL 3 BASIC23.63■■□□□ 1.37
HCFC2Q9Y5Z7 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
HCFC2Q9Y5Z7 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
HCFC2Q9Y5Z7 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
HCFC2Q9Y5Z7 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
HCFC2Q9Y5Z7 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
HCFC2Q9Y5Z7 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
HCFC2Q9Y5Z7 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
HCFC2Q9Y5Z7 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
HCFC2Q9Y5Z7 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
HCFC2Q9Y5Z7 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
HCFC2Q9Y5Z7 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
HCFC2Q9Y5Z7 TMEM202-AS1-202ENST00000565181 2325 ntBASIC23.61■■□□□ 1.37
HCFC2Q9Y5Z7 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
HCFC2Q9Y5Z7 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC23.61■■□□□ 1.37
HCFC2Q9Y5Z7 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC23.61■■□□□ 1.37
HCFC2Q9Y5Z7 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC23.61■■□□□ 1.37
HCFC2Q9Y5Z7 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC23.61■■□□□ 1.37
HCFC2Q9Y5Z7 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC23.61■■□□□ 1.37
HCFC2Q9Y5Z7 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
HCFC2Q9Y5Z7 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
HCFC2Q9Y5Z7 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
HCFC2Q9Y5Z7 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 467.4 ms