Protein–RNA interactions for Protein: Q9Y5H1

PCDHGA2, Protocadherin gamma-A2, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA2Q9Y5H1 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC22.74■■□□□ 1.23
PCDHGA2Q9Y5H1 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
PCDHGA2Q9Y5H1 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
PCDHGA2Q9Y5H1 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
PCDHGA2Q9Y5H1 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC22.73■■□□□ 1.23
PCDHGA2Q9Y5H1 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
PCDHGA2Q9Y5H1 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
PCDHGA2Q9Y5H1 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC22.73■■□□□ 1.23
PCDHGA2Q9Y5H1 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC22.73■■□□□ 1.23
PCDHGA2Q9Y5H1 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC22.73■■□□□ 1.23
PCDHGA2Q9Y5H1 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
PCDHGA2Q9Y5H1 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
PCDHGA2Q9Y5H1 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC22.72■■□□□ 1.23
PCDHGA2Q9Y5H1 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC22.72■■□□□ 1.23
PCDHGA2Q9Y5H1 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC22.72■■□□□ 1.23
PCDHGA2Q9Y5H1 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
PCDHGA2Q9Y5H1 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
PCDHGA2Q9Y5H1 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC22.72■■□□□ 1.23
PCDHGA2Q9Y5H1 AC080038.1-201ENST00000611274 1154 ntBASIC22.72■■□□□ 1.23
PCDHGA2Q9Y5H1 AL022069.1-201ENST00000568025 1636 ntBASIC22.71■■□□□ 1.23
PCDHGA2Q9Y5H1 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC22.71■■□□□ 1.23
PCDHGA2Q9Y5H1 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
PCDHGA2Q9Y5H1 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC22.71■■□□□ 1.23
PCDHGA2Q9Y5H1 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
PCDHGA2Q9Y5H1 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC22.71■■□□□ 1.23
PCDHGA2Q9Y5H1 EMC9-206ENST00000560403 872 ntTSL 2 BASIC22.71■■□□□ 1.23
PCDHGA2Q9Y5H1 NKILA-201ENST00000613231 537 ntTSL 4 BASIC22.71■■□□□ 1.23
PCDHGA2Q9Y5H1 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
PCDHGA2Q9Y5H1 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC22.71■■□□□ 1.23
PCDHGA2Q9Y5H1 CEBPA-AS1-201ENST00000592982 2198 ntBASIC22.7■■□□□ 1.23
PCDHGA2Q9Y5H1 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
PCDHGA2Q9Y5H1 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
PCDHGA2Q9Y5H1 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
PCDHGA2Q9Y5H1 ABHD17AP1-201ENST00000358206 933 ntBASIC22.7■■□□□ 1.22
PCDHGA2Q9Y5H1 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
PCDHGA2Q9Y5H1 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
PCDHGA2Q9Y5H1 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC22.7■■□□□ 1.22
PCDHGA2Q9Y5H1 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
PCDHGA2Q9Y5H1 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
PCDHGA2Q9Y5H1 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC22.69■■□□□ 1.22
PCDHGA2Q9Y5H1 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC22.69■■□□□ 1.22
PCDHGA2Q9Y5H1 ESRRAP2-201ENST00000418437 1549 ntBASIC22.69■■□□□ 1.22
PCDHGA2Q9Y5H1 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC22.69■■□□□ 1.22
PCDHGA2Q9Y5H1 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
PCDHGA2Q9Y5H1 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC22.69■■□□□ 1.22
PCDHGA2Q9Y5H1 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
PCDHGA2Q9Y5H1 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
PCDHGA2Q9Y5H1 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC22.69■■□□□ 1.22
PCDHGA2Q9Y5H1 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
PCDHGA2Q9Y5H1 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
PCDHGA2Q9Y5H1 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
PCDHGA2Q9Y5H1 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC22.68■■□□□ 1.22
PCDHGA2Q9Y5H1 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
PCDHGA2Q9Y5H1 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC22.68■■□□□ 1.22
PCDHGA2Q9Y5H1 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
PCDHGA2Q9Y5H1 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC22.68■■□□□ 1.22
PCDHGA2Q9Y5H1 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC22.68■■□□□ 1.22
PCDHGA2Q9Y5H1 GXYLT1P5-201ENST00000614548 1189 ntBASIC22.68■■□□□ 1.22
PCDHGA2Q9Y5H1 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC22.68■■□□□ 1.22
PCDHGA2Q9Y5H1 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC22.68■■□□□ 1.22
PCDHGA2Q9Y5H1 GTSE1-AS1-202ENST00000623117 1518 ntBASIC22.67■■□□□ 1.22
PCDHGA2Q9Y5H1 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC22.67■■□□□ 1.22
PCDHGA2Q9Y5H1 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
PCDHGA2Q9Y5H1 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
PCDHGA2Q9Y5H1 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC22.67■■□□□ 1.22
PCDHGA2Q9Y5H1 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC22.67■■□□□ 1.22
PCDHGA2Q9Y5H1 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC22.67■■□□□ 1.22
PCDHGA2Q9Y5H1 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
PCDHGA2Q9Y5H1 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
PCDHGA2Q9Y5H1 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
PCDHGA2Q9Y5H1 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
PCDHGA2Q9Y5H1 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
PCDHGA2Q9Y5H1 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
PCDHGA2Q9Y5H1 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
PCDHGA2Q9Y5H1 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
PCDHGA2Q9Y5H1 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
PCDHGA2Q9Y5H1 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC22.66■■□□□ 1.22
PCDHGA2Q9Y5H1 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC22.66■■□□□ 1.22
PCDHGA2Q9Y5H1 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC22.66■■□□□ 1.22
PCDHGA2Q9Y5H1 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC22.66■■□□□ 1.22
PCDHGA2Q9Y5H1 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
PCDHGA2Q9Y5H1 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC22.66■■□□□ 1.22
PCDHGA2Q9Y5H1 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
PCDHGA2Q9Y5H1 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PCDHGA2Q9Y5H1 AC006015.1-201ENST00000429970 570 ntBASIC22.65■■□□□ 1.22
PCDHGA2Q9Y5H1 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
PCDHGA2Q9Y5H1 RAP2CP1-201ENST00000605103 478 ntBASIC22.65■■□□□ 1.22
PCDHGA2Q9Y5H1 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
PCDHGA2Q9Y5H1 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
PCDHGA2Q9Y5H1 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC22.65■■□□□ 1.22
PCDHGA2Q9Y5H1 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC22.65■■□□□ 1.22
PCDHGA2Q9Y5H1 AC093323.1-202ENST00000635031 2045 ntBASIC22.65■■□□□ 1.22
PCDHGA2Q9Y5H1 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PCDHGA2Q9Y5H1 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
PCDHGA2Q9Y5H1 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PCDHGA2Q9Y5H1 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PCDHGA2Q9Y5H1 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
PCDHGA2Q9Y5H1 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
PCDHGA2Q9Y5H1 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC22.64■■□□□ 1.22
PCDHGA2Q9Y5H1 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC22.64■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms