Protein–RNA interactions for Protein: Q9Y4C1

KDM3A, Lysine-specific demethylase 3A, humanhuman

Predictions only

Length 1,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3AQ9Y4C1 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC25.26■■□□□ 1.63
KDM3AQ9Y4C1 AC135279.3-201ENST00000610945 1311 ntBASIC25.26■■□□□ 1.63
KDM3AQ9Y4C1 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC25.26■■□□□ 1.63
KDM3AQ9Y4C1 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC25.26■■□□□ 1.63
KDM3AQ9Y4C1 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC25.26■■□□□ 1.63
KDM3AQ9Y4C1 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
KDM3AQ9Y4C1 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
KDM3AQ9Y4C1 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC25.26■■□□□ 1.63
KDM3AQ9Y4C1 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC25.26■■□□□ 1.63
KDM3AQ9Y4C1 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
KDM3AQ9Y4C1 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
KDM3AQ9Y4C1 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC25.26■■□□□ 1.63
KDM3AQ9Y4C1 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC25.25■■□□□ 1.63
KDM3AQ9Y4C1 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC25.25■■□□□ 1.63
KDM3AQ9Y4C1 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
KDM3AQ9Y4C1 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
KDM3AQ9Y4C1 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
KDM3AQ9Y4C1 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
KDM3AQ9Y4C1 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC25.25■■□□□ 1.63
KDM3AQ9Y4C1 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC25.25■■□□□ 1.63
KDM3AQ9Y4C1 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
KDM3AQ9Y4C1 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
KDM3AQ9Y4C1 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC25.25■■□□□ 1.63
KDM3AQ9Y4C1 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC25.25■■□□□ 1.63
KDM3AQ9Y4C1 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
KDM3AQ9Y4C1 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC25.24■■□□□ 1.63
KDM3AQ9Y4C1 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
KDM3AQ9Y4C1 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC25.24■■□□□ 1.63
KDM3AQ9Y4C1 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC25.24■■□□□ 1.63
KDM3AQ9Y4C1 RARA-203ENST00000394086 2008 ntTSL 2 BASIC25.24■■□□□ 1.63
KDM3AQ9Y4C1 EBPL-204ENST00000378272 766 ntTSL 3 BASIC25.24■■□□□ 1.63
KDM3AQ9Y4C1 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC25.24■■□□□ 1.63
KDM3AQ9Y4C1 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC25.24■■□□□ 1.63
KDM3AQ9Y4C1 SUDS3P1-201ENST00000505831 966 ntBASIC25.24■■□□□ 1.63
KDM3AQ9Y4C1 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
KDM3AQ9Y4C1 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
KDM3AQ9Y4C1 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC25.24■■□□□ 1.63
KDM3AQ9Y4C1 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC25.23■■□□□ 1.63
KDM3AQ9Y4C1 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC25.23■■□□□ 1.63
KDM3AQ9Y4C1 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
KDM3AQ9Y4C1 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
KDM3AQ9Y4C1 DUX4L19-201ENST00000557448 1267 ntBASIC25.23■■□□□ 1.63
KDM3AQ9Y4C1 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
KDM3AQ9Y4C1 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC25.22■■□□□ 1.63
KDM3AQ9Y4C1 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
KDM3AQ9Y4C1 DUSP8P5-201ENST00000422884 1815 ntBASIC25.22■■□□□ 1.63
KDM3AQ9Y4C1 AC079630.1-202ENST00000618127 1840 ntBASIC25.22■■□□□ 1.63
KDM3AQ9Y4C1 EDA-201ENST00000338901 1233 ntBASIC25.22■■□□□ 1.63
KDM3AQ9Y4C1 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC25.22■■□□□ 1.63
KDM3AQ9Y4C1 AC024257.2-201ENST00000549699 147 ntBASIC25.22■■□□□ 1.63
KDM3AQ9Y4C1 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC25.22■■□□□ 1.63
KDM3AQ9Y4C1 SF1-220ENST00000626028 704 ntTSL 2 BASIC25.22■■□□□ 1.63
KDM3AQ9Y4C1 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC25.22■■□□□ 1.63
KDM3AQ9Y4C1 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC25.22■■□□□ 1.63
KDM3AQ9Y4C1 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC25.21■■□□□ 1.63
KDM3AQ9Y4C1 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
KDM3AQ9Y4C1 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC25.21■■□□□ 1.63
KDM3AQ9Y4C1 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC25.21■■□□□ 1.63
KDM3AQ9Y4C1 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
KDM3AQ9Y4C1 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
KDM3AQ9Y4C1 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
KDM3AQ9Y4C1 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
KDM3AQ9Y4C1 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC25.2■■□□□ 1.63
KDM3AQ9Y4C1 AC009102.2-201ENST00000606772 1639 ntBASIC25.2■■□□□ 1.62
KDM3AQ9Y4C1 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC25.2■■□□□ 1.62
KDM3AQ9Y4C1 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
KDM3AQ9Y4C1 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
KDM3AQ9Y4C1 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC25.2■■□□□ 1.62
KDM3AQ9Y4C1 AC142381.2-201ENST00000566120 298 ntBASIC25.2■■□□□ 1.62
KDM3AQ9Y4C1 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC25.2■■□□□ 1.62
KDM3AQ9Y4C1 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
KDM3AQ9Y4C1 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
KDM3AQ9Y4C1 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC25.2■■□□□ 1.62
KDM3AQ9Y4C1 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC25.2■■□□□ 1.62
KDM3AQ9Y4C1 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC25.2■■□□□ 1.62
KDM3AQ9Y4C1 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC25.2■■□□□ 1.62
KDM3AQ9Y4C1 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
KDM3AQ9Y4C1 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
KDM3AQ9Y4C1 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
KDM3AQ9Y4C1 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC25.19■■□□□ 1.62
KDM3AQ9Y4C1 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC25.19■■□□□ 1.62
KDM3AQ9Y4C1 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC25.19■■□□□ 1.62
KDM3AQ9Y4C1 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC25.19■■□□□ 1.62
KDM3AQ9Y4C1 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC25.19■■□□□ 1.62
KDM3AQ9Y4C1 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
KDM3AQ9Y4C1 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC25.18■■□□□ 1.62
KDM3AQ9Y4C1 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
KDM3AQ9Y4C1 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC25.18■■□□□ 1.62
KDM3AQ9Y4C1 AC092171.4-201ENST00000609130 632 ntBASIC25.18■■□□□ 1.62
KDM3AQ9Y4C1 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC25.18■■□□□ 1.62
KDM3AQ9Y4C1 AC144652.1-201ENST00000609974 1624 ntBASIC25.18■■□□□ 1.62
KDM3AQ9Y4C1 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC25.18■■□□□ 1.62
KDM3AQ9Y4C1 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC25.18■■□□□ 1.62
KDM3AQ9Y4C1 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC25.18■■□□□ 1.62
KDM3AQ9Y4C1 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
KDM3AQ9Y4C1 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
KDM3AQ9Y4C1 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC25.17■■□□□ 1.62
KDM3AQ9Y4C1 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
KDM3AQ9Y4C1 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC25.17■■□□□ 1.62
KDM3AQ9Y4C1 AL355001.2-201ENST00000620617 1191 ntBASIC25.17■■□□□ 1.62
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms