Protein–RNA interactions for Protein: Q9Y279

VSIG4, V-set and immunoglobulin domain-containing protein 4, humanhuman

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSIG4Q9Y279 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
VSIG4Q9Y279 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
VSIG4Q9Y279 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
VSIG4Q9Y279 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC18.88■□□□□ 0.61
VSIG4Q9Y279 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
VSIG4Q9Y279 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
VSIG4Q9Y279 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC18.88■□□□□ 0.61
VSIG4Q9Y279 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
VSIG4Q9Y279 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
VSIG4Q9Y279 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
VSIG4Q9Y279 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
VSIG4Q9Y279 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC18.88■□□□□ 0.61
VSIG4Q9Y279 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
VSIG4Q9Y279 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
VSIG4Q9Y279 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC18.87■□□□□ 0.61
VSIG4Q9Y279 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
VSIG4Q9Y279 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
VSIG4Q9Y279 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC18.87■□□□□ 0.61
VSIG4Q9Y279 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
VSIG4Q9Y279 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC18.87■□□□□ 0.61
VSIG4Q9Y279 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
VSIG4Q9Y279 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC18.86■□□□□ 0.61
VSIG4Q9Y279 AC090877.2-201ENST00000558441 1738 ntBASIC18.86■□□□□ 0.61
VSIG4Q9Y279 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
VSIG4Q9Y279 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
VSIG4Q9Y279 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
VSIG4Q9Y279 AC129492.7-201ENST00000622992 756 ntBASIC18.86■□□□□ 0.61
VSIG4Q9Y279 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
VSIG4Q9Y279 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC18.86■□□□□ 0.61
VSIG4Q9Y279 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
VSIG4Q9Y279 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
VSIG4Q9Y279 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
VSIG4Q9Y279 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
VSIG4Q9Y279 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
VSIG4Q9Y279 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
VSIG4Q9Y279 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
VSIG4Q9Y279 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
VSIG4Q9Y279 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
VSIG4Q9Y279 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
VSIG4Q9Y279 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
VSIG4Q9Y279 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
VSIG4Q9Y279 TSPY13P-201ENST00000338964 914 ntBASIC18.85■□□□□ 0.61
VSIG4Q9Y279 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
VSIG4Q9Y279 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
VSIG4Q9Y279 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
VSIG4Q9Y279 AC139530.1-201ENST00000575312 1977 ntBASIC18.84■□□□□ 0.61
VSIG4Q9Y279 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
VSIG4Q9Y279 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
VSIG4Q9Y279 AC004987.1-201ENST00000428627 508 ntBASIC18.84■□□□□ 0.61
VSIG4Q9Y279 ATP5G2P3-201ENST00000429083 425 ntBASIC18.84■□□□□ 0.61
VSIG4Q9Y279 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
VSIG4Q9Y279 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
VSIG4Q9Y279 BID-212ENST00000614949 1988 ntTSL 5 BASIC18.84■□□□□ 0.61
VSIG4Q9Y279 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
VSIG4Q9Y279 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC18.84■□□□□ 0.61
VSIG4Q9Y279 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VSIG4Q9Y279 C11orf96-202ENST00000528572 1834 ntBASIC18.84■□□□□ 0.61
VSIG4Q9Y279 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
VSIG4Q9Y279 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
VSIG4Q9Y279 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC18.83■□□□□ 0.61
VSIG4Q9Y279 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
VSIG4Q9Y279 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.61
VSIG4Q9Y279 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
VSIG4Q9Y279 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC18.83■□□□□ 0.6
VSIG4Q9Y279 AL033527.3-201ENST00000566366 1196 ntBASIC18.83■□□□□ 0.6
VSIG4Q9Y279 AC018755.3-202ENST00000596210 929 ntBASIC18.83■□□□□ 0.6
VSIG4Q9Y279 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
VSIG4Q9Y279 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
VSIG4Q9Y279 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
VSIG4Q9Y279 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
VSIG4Q9Y279 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
VSIG4Q9Y279 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
VSIG4Q9Y279 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
VSIG4Q9Y279 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
VSIG4Q9Y279 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC18.82■□□□□ 0.6
VSIG4Q9Y279 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
VSIG4Q9Y279 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
VSIG4Q9Y279 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC18.82■□□□□ 0.6
VSIG4Q9Y279 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
VSIG4Q9Y279 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
VSIG4Q9Y279 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
VSIG4Q9Y279 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
VSIG4Q9Y279 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
VSIG4Q9Y279 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
VSIG4Q9Y279 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC18.82■□□□□ 0.6
VSIG4Q9Y279 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC18.82■□□□□ 0.6
VSIG4Q9Y279 AC092053.2-201ENST00000640557 1818 ntBASIC18.81■□□□□ 0.6
VSIG4Q9Y279 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VSIG4Q9Y279 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
VSIG4Q9Y279 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
VSIG4Q9Y279 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VSIG4Q9Y279 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
VSIG4Q9Y279 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
VSIG4Q9Y279 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
VSIG4Q9Y279 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
VSIG4Q9Y279 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VSIG4Q9Y279 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
VSIG4Q9Y279 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
VSIG4Q9Y279 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VSIG4Q9Y279 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms