Protein–RNA interactions for Protein: Q9NZP6

NPAP1, Nuclear pore-associated protein 1, humanhuman

Predictions only

Length 1,156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAP1Q9NZP6 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC20.26■□□□□ 0.83
NPAP1Q9NZP6 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NPAP1Q9NZP6 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NPAP1Q9NZP6 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
NPAP1Q9NZP6 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NPAP1Q9NZP6 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC20.26■□□□□ 0.83
NPAP1Q9NZP6 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NPAP1Q9NZP6 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NPAP1Q9NZP6 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NPAP1Q9NZP6 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NPAP1Q9NZP6 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NPAP1Q9NZP6 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
NPAP1Q9NZP6 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NPAP1Q9NZP6 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
NPAP1Q9NZP6 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NPAP1Q9NZP6 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
NPAP1Q9NZP6 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.25■□□□□ 0.83
NPAP1Q9NZP6 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.25■□□□□ 0.83
NPAP1Q9NZP6 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC20.25■□□□□ 0.83
NPAP1Q9NZP6 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NPAP1Q9NZP6 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.25■□□□□ 0.83
NPAP1Q9NZP6 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
NPAP1Q9NZP6 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
NPAP1Q9NZP6 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NPAP1Q9NZP6 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
NPAP1Q9NZP6 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
NPAP1Q9NZP6 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
NPAP1Q9NZP6 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NPAP1Q9NZP6 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NPAP1Q9NZP6 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC20.24■□□□□ 0.83
NPAP1Q9NZP6 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20.24■□□□□ 0.83
NPAP1Q9NZP6 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NPAP1Q9NZP6 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NPAP1Q9NZP6 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NPAP1Q9NZP6 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.24■□□□□ 0.83
NPAP1Q9NZP6 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
NPAP1Q9NZP6 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
NPAP1Q9NZP6 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NPAP1Q9NZP6 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NPAP1Q9NZP6 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NPAP1Q9NZP6 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
NPAP1Q9NZP6 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NPAP1Q9NZP6 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
NPAP1Q9NZP6 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NPAP1Q9NZP6 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NPAP1Q9NZP6 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC20.23■□□□□ 0.83
NPAP1Q9NZP6 MTDHP2-201ENST00000601468 714 ntBASIC20.23■□□□□ 0.83
NPAP1Q9NZP6 AC010997.5-201ENST00000609182 354 ntBASIC20.23■□□□□ 0.83
NPAP1Q9NZP6 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
NPAP1Q9NZP6 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC20.23■□□□□ 0.83
NPAP1Q9NZP6 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
NPAP1Q9NZP6 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NPAP1Q9NZP6 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
NPAP1Q9NZP6 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
NPAP1Q9NZP6 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
NPAP1Q9NZP6 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NPAP1Q9NZP6 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC20.22■□□□□ 0.83
NPAP1Q9NZP6 CLTA-210ENST00000540080 989 ntTSL 2 BASIC20.22■□□□□ 0.83
NPAP1Q9NZP6 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
NPAP1Q9NZP6 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NPAP1Q9NZP6 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.22■□□□□ 0.83
NPAP1Q9NZP6 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC20.21■□□□□ 0.83
NPAP1Q9NZP6 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
NPAP1Q9NZP6 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
NPAP1Q9NZP6 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC20.21■□□□□ 0.83
NPAP1Q9NZP6 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC20.21■□□□□ 0.83
NPAP1Q9NZP6 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
NPAP1Q9NZP6 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
NPAP1Q9NZP6 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC20.2■□□□□ 0.83
NPAP1Q9NZP6 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.2■□□□□ 0.82
NPAP1Q9NZP6 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NPAP1Q9NZP6 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
NPAP1Q9NZP6 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NPAP1Q9NZP6 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
NPAP1Q9NZP6 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
NPAP1Q9NZP6 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NPAP1Q9NZP6 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NPAP1Q9NZP6 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.2■□□□□ 0.82
NPAP1Q9NZP6 LSM4-201ENST00000252816 986 ntTSL 2 BASIC20.2■□□□□ 0.82
NPAP1Q9NZP6 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
NPAP1Q9NZP6 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC20.2■□□□□ 0.82
NPAP1Q9NZP6 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC20.2■□□□□ 0.82
NPAP1Q9NZP6 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.2■□□□□ 0.82
NPAP1Q9NZP6 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
NPAP1Q9NZP6 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
NPAP1Q9NZP6 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC20.2■□□□□ 0.82
NPAP1Q9NZP6 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NPAP1Q9NZP6 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.2■□□□□ 0.82
NPAP1Q9NZP6 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NPAP1Q9NZP6 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
NPAP1Q9NZP6 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NPAP1Q9NZP6 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
NPAP1Q9NZP6 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
NPAP1Q9NZP6 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC20.19■□□□□ 0.82
NPAP1Q9NZP6 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC20.19■□□□□ 0.82
NPAP1Q9NZP6 SNX5-217ENST00000606557 1087 ntBASIC20.19■□□□□ 0.82
NPAP1Q9NZP6 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.19■□□□□ 0.82
NPAP1Q9NZP6 MIR6089-201ENST00000616698 64 ntBASIC20.19■□□□□ 0.82
NPAP1Q9NZP6 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NPAP1Q9NZP6 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms