Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 SRR-208ENST00000576848 588 ntTSL 4 BASIC21.38■■□□□ 1.01
NECTIN3Q9NQS3 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC21.38■■□□□ 1.01
NECTIN3Q9NQS3 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
NECTIN3Q9NQS3 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
NECTIN3Q9NQS3 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
NECTIN3Q9NQS3 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
NECTIN3Q9NQS3 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC21.37■■□□□ 1.01
NECTIN3Q9NQS3 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC21.37■■□□□ 1.01
NECTIN3Q9NQS3 TRIR-202ENST00000588213 841 ntTSL 3 BASIC21.37■■□□□ 1.01
NECTIN3Q9NQS3 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
NECTIN3Q9NQS3 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC21.37■■□□□ 1.01
NECTIN3Q9NQS3 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
NECTIN3Q9NQS3 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC21.37■■□□□ 1.01
NECTIN3Q9NQS3 AL117328.2-201ENST00000624617 1940 ntBASIC21.37■■□□□ 1.01
NECTIN3Q9NQS3 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC21.37■■□□□ 1.01
NECTIN3Q9NQS3 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
NECTIN3Q9NQS3 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC21.36■■□□□ 1.01
NECTIN3Q9NQS3 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
NECTIN3Q9NQS3 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC21.36■■□□□ 1.01
NECTIN3Q9NQS3 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
NECTIN3Q9NQS3 RPP21-222ENST00000433076 577 ntTSL 2 BASIC21.36■■□□□ 1.01
NECTIN3Q9NQS3 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC21.36■■□□□ 1.01
NECTIN3Q9NQS3 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC21.36■■□□□ 1.01
NECTIN3Q9NQS3 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC21.36■■□□□ 1.01
NECTIN3Q9NQS3 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC21.36■■□□□ 1.01
NECTIN3Q9NQS3 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
NECTIN3Q9NQS3 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21.36■■□□□ 1.01
NECTIN3Q9NQS3 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
NECTIN3Q9NQS3 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
NECTIN3Q9NQS3 EI24-213ENST00000618552 1747 ntTSL 5 BASIC21.35■■□□□ 1.01
NECTIN3Q9NQS3 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
NECTIN3Q9NQS3 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
NECTIN3Q9NQS3 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
NECTIN3Q9NQS3 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
NECTIN3Q9NQS3 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
NECTIN3Q9NQS3 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
NECTIN3Q9NQS3 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
NECTIN3Q9NQS3 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
NECTIN3Q9NQS3 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
NECTIN3Q9NQS3 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
NECTIN3Q9NQS3 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
NECTIN3Q9NQS3 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
NECTIN3Q9NQS3 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC21.34■■□□□ 1.01
NECTIN3Q9NQS3 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
NECTIN3Q9NQS3 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
NECTIN3Q9NQS3 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC21.34■■□□□ 1.01
NECTIN3Q9NQS3 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
NECTIN3Q9NQS3 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC21.33■■□□□ 1.01
NECTIN3Q9NQS3 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
NECTIN3Q9NQS3 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
NECTIN3Q9NQS3 QDPR-206ENST00000508623 601 ntTSL 3 BASIC21.33■■□□□ 1.01
NECTIN3Q9NQS3 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC21.33■■□□□ 1.01
NECTIN3Q9NQS3 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC21.33■■□□□ 1.01
NECTIN3Q9NQS3 RASSF1-AS1-201ENST00000629828 790 ntBASIC21.33■■□□□ 1.01
NECTIN3Q9NQS3 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
NECTIN3Q9NQS3 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC21.33■■□□□ 1
NECTIN3Q9NQS3 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
NECTIN3Q9NQS3 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC21.33■■□□□ 1
NECTIN3Q9NQS3 USF2-207ENST00000595068 1612 ntTSL 5 BASIC21.33■■□□□ 1
NECTIN3Q9NQS3 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
NECTIN3Q9NQS3 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC21.32■■□□□ 1
NECTIN3Q9NQS3 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
NECTIN3Q9NQS3 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC21.32■■□□□ 1
NECTIN3Q9NQS3 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
NECTIN3Q9NQS3 AC131281.2-201ENST00000520478 145 ntBASIC21.32■■□□□ 1
NECTIN3Q9NQS3 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC21.32■■□□□ 1
NECTIN3Q9NQS3 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
NECTIN3Q9NQS3 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
NECTIN3Q9NQS3 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC21.32■■□□□ 1
NECTIN3Q9NQS3 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC21.32■■□□□ 1
NECTIN3Q9NQS3 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
NECTIN3Q9NQS3 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
NECTIN3Q9NQS3 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.32■■□□□ 1
NECTIN3Q9NQS3 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
NECTIN3Q9NQS3 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
NECTIN3Q9NQS3 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC21.31■■□□□ 1
NECTIN3Q9NQS3 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
NECTIN3Q9NQS3 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC21.31■■□□□ 1
NECTIN3Q9NQS3 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
NECTIN3Q9NQS3 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
NECTIN3Q9NQS3 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
NECTIN3Q9NQS3 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC21.31■■□□□ 1
NECTIN3Q9NQS3 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC21.31■■□□□ 1
NECTIN3Q9NQS3 AL512631.2-201ENST00000604634 923 ntBASIC21.31■■□□□ 1
NECTIN3Q9NQS3 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
NECTIN3Q9NQS3 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC21.31■■□□□ 1
NECTIN3Q9NQS3 ABCB10P4-201ENST00000566803 2184 ntBASIC21.31■■□□□ 1
NECTIN3Q9NQS3 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
NECTIN3Q9NQS3 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC21.31■■□□□ 1
NECTIN3Q9NQS3 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
NECTIN3Q9NQS3 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
NECTIN3Q9NQS3 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
NECTIN3Q9NQS3 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC21.3■■□□□ 1
NECTIN3Q9NQS3 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC21.3■■□□□ 1
NECTIN3Q9NQS3 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC21.3■■□□□ 1
NECTIN3Q9NQS3 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
NECTIN3Q9NQS3 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC21.3■■□□□ 1
NECTIN3Q9NQS3 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
NECTIN3Q9NQS3 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC21.29■■□□□ 1
NECTIN3Q9NQS3 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC21.29■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms