Protein–RNA interactions for Protein: Q9NPJ1

MKKS, McKusick-Kaufman/Bardet-Biedl syndromes putative chaperonin, humanhuman

Predicted RBP Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKKSQ9NPJ1 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC21.18■□□□□ 0.98
MKKSQ9NPJ1 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
MKKSQ9NPJ1 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
MKKSQ9NPJ1 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
MKKSQ9NPJ1 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
MKKSQ9NPJ1 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
MKKSQ9NPJ1 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC21.17■□□□□ 0.98
MKKSQ9NPJ1 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC21.17■□□□□ 0.98
MKKSQ9NPJ1 AC005837.3-201ENST00000612163 286 ntBASIC21.17■□□□□ 0.98
MKKSQ9NPJ1 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
MKKSQ9NPJ1 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC21.17■□□□□ 0.98
MKKSQ9NPJ1 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
MKKSQ9NPJ1 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
MKKSQ9NPJ1 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
MKKSQ9NPJ1 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
MKKSQ9NPJ1 AC011298.3-201ENST00000615796 283 ntBASIC21.16■□□□□ 0.98
MKKSQ9NPJ1 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
MKKSQ9NPJ1 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
MKKSQ9NPJ1 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
MKKSQ9NPJ1 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC21.15■□□□□ 0.98
MKKSQ9NPJ1 FP325331.1-202ENST00000623531 1380 ntBASIC21.15■□□□□ 0.98
MKKSQ9NPJ1 EDA-201ENST00000338901 1233 ntBASIC21.15■□□□□ 0.98
MKKSQ9NPJ1 AC006455.2-201ENST00000429931 906 ntBASIC21.15■□□□□ 0.98
MKKSQ9NPJ1 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
MKKSQ9NPJ1 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
MKKSQ9NPJ1 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
MKKSQ9NPJ1 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
MKKSQ9NPJ1 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC21.15■□□□□ 0.98
MKKSQ9NPJ1 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
MKKSQ9NPJ1 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
MKKSQ9NPJ1 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC21.14■□□□□ 0.98
MKKSQ9NPJ1 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
MKKSQ9NPJ1 ASB1-202ENST00000409297 878 ntTSL 5 BASIC21.14■□□□□ 0.97
MKKSQ9NPJ1 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC21.14■□□□□ 0.97
MKKSQ9NPJ1 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
MKKSQ9NPJ1 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
MKKSQ9NPJ1 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC21.13■□□□□ 0.97
MKKSQ9NPJ1 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
MKKSQ9NPJ1 HES6-206ENST00000409574 738 ntTSL 2 BASIC21.13■□□□□ 0.97
MKKSQ9NPJ1 PTMA-205ENST00000410064 814 ntTSL 2 BASIC21.13■□□□□ 0.97
MKKSQ9NPJ1 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC21.13■□□□□ 0.97
MKKSQ9NPJ1 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC21.13■□□□□ 0.97
MKKSQ9NPJ1 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
MKKSQ9NPJ1 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
MKKSQ9NPJ1 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC21.13■□□□□ 0.97
MKKSQ9NPJ1 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
MKKSQ9NPJ1 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
MKKSQ9NPJ1 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.12■□□□□ 0.97
MKKSQ9NPJ1 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
MKKSQ9NPJ1 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
MKKSQ9NPJ1 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
MKKSQ9NPJ1 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
MKKSQ9NPJ1 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC21.12■□□□□ 0.97
MKKSQ9NPJ1 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC21.12■□□□□ 0.97
MKKSQ9NPJ1 MIR3181-201ENST00000578512 73 ntBASIC21.12■□□□□ 0.97
MKKSQ9NPJ1 AL355001.2-201ENST00000620617 1191 ntBASIC21.12■□□□□ 0.97
MKKSQ9NPJ1 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
MKKSQ9NPJ1 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC21.12■□□□□ 0.97
MKKSQ9NPJ1 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC21.12■□□□□ 0.97
MKKSQ9NPJ1 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC21.12■□□□□ 0.97
MKKSQ9NPJ1 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
MKKSQ9NPJ1 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC21.11■□□□□ 0.97
MKKSQ9NPJ1 AC144652.1-201ENST00000609974 1624 ntBASIC21.11■□□□□ 0.97
MKKSQ9NPJ1 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
MKKSQ9NPJ1 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
MKKSQ9NPJ1 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
MKKSQ9NPJ1 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
MKKSQ9NPJ1 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
MKKSQ9NPJ1 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
MKKSQ9NPJ1 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC21.11■□□□□ 0.97
MKKSQ9NPJ1 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC21.11■□□□□ 0.97
MKKSQ9NPJ1 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
MKKSQ9NPJ1 MIR4767-201ENST00000582827 78 ntBASIC21.11■□□□□ 0.97
MKKSQ9NPJ1 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC21.11■□□□□ 0.97
MKKSQ9NPJ1 ABCB10P4-201ENST00000566803 2184 ntBASIC21.11■□□□□ 0.97
MKKSQ9NPJ1 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC21.11■□□□□ 0.97
MKKSQ9NPJ1 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
MKKSQ9NPJ1 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
MKKSQ9NPJ1 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
MKKSQ9NPJ1 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC21.11■□□□□ 0.97
MKKSQ9NPJ1 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
MKKSQ9NPJ1 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
MKKSQ9NPJ1 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
MKKSQ9NPJ1 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
MKKSQ9NPJ1 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
MKKSQ9NPJ1 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
MKKSQ9NPJ1 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
MKKSQ9NPJ1 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC21.1■□□□□ 0.97
MKKSQ9NPJ1 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
MKKSQ9NPJ1 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC21.1■□□□□ 0.97
MKKSQ9NPJ1 AC142381.2-201ENST00000566120 298 ntBASIC21.1■□□□□ 0.97
MKKSQ9NPJ1 pRNA.6-201ENST00000610482 90 ntBASIC21.1■□□□□ 0.97
MKKSQ9NPJ1 pRNA.5-201ENST00000612139 90 ntBASIC21.1■□□□□ 0.97
MKKSQ9NPJ1 pRNA.11-201ENST00000618423 90 ntBASIC21.1■□□□□ 0.97
MKKSQ9NPJ1 pRNA.13-201ENST00000619112 90 ntBASIC21.1■□□□□ 0.97
MKKSQ9NPJ1 AC136469.2-201ENST00000623944 1028 ntBASIC21.1■□□□□ 0.97
MKKSQ9NPJ1 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
MKKSQ9NPJ1 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
MKKSQ9NPJ1 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
MKKSQ9NPJ1 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 12.9 ms