Protein–RNA interactions for Protein: Q9H1C7

CYSTM1, Cysteine-rich and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 97 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1Q9H1C7 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CYSTM1Q9H1C7 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CYSTM1Q9H1C7 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CYSTM1Q9H1C7 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CYSTM1Q9H1C7 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC13.22□□□□□ -0.29
CYSTM1Q9H1C7 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CYSTM1Q9H1C7 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CYSTM1Q9H1C7 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CYSTM1Q9H1C7 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CYSTM1Q9H1C7 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CYSTM1Q9H1C7 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC13.22□□□□□ -0.29
CYSTM1Q9H1C7 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CYSTM1Q9H1C7 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC13.22□□□□□ -0.29
CYSTM1Q9H1C7 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
CYSTM1Q9H1C7 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CYSTM1Q9H1C7 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
CYSTM1Q9H1C7 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
CYSTM1Q9H1C7 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CYSTM1Q9H1C7 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CYSTM1Q9H1C7 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC13.21□□□□□ -0.29
CYSTM1Q9H1C7 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC13.21□□□□□ -0.29
CYSTM1Q9H1C7 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CYSTM1Q9H1C7 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CYSTM1Q9H1C7 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CYSTM1Q9H1C7 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CYSTM1Q9H1C7 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CYSTM1Q9H1C7 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
CYSTM1Q9H1C7 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
CYSTM1Q9H1C7 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
CYSTM1Q9H1C7 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.3
CYSTM1Q9H1C7 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
CYSTM1Q9H1C7 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CYSTM1Q9H1C7 AC005082.1-201ENST00000413042 2259 ntBASIC13.2□□□□□ -0.3
CYSTM1Q9H1C7 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC13.2□□□□□ -0.3
CYSTM1Q9H1C7 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CYSTM1Q9H1C7 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
CYSTM1Q9H1C7 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CYSTM1Q9H1C7 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
CYSTM1Q9H1C7 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CYSTM1Q9H1C7 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CYSTM1Q9H1C7 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC13.2□□□□□ -0.3
CYSTM1Q9H1C7 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC13.2□□□□□ -0.3
CYSTM1Q9H1C7 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
CYSTM1Q9H1C7 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC13.2□□□□□ -0.3
CYSTM1Q9H1C7 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
CYSTM1Q9H1C7 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CYSTM1Q9H1C7 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC13.2□□□□□ -0.3
CYSTM1Q9H1C7 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CYSTM1Q9H1C7 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CYSTM1Q9H1C7 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC13.19□□□□□ -0.3
CYSTM1Q9H1C7 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CYSTM1Q9H1C7 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CYSTM1Q9H1C7 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CYSTM1Q9H1C7 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CYSTM1Q9H1C7 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CYSTM1Q9H1C7 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CYSTM1Q9H1C7 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CYSTM1Q9H1C7 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC13.19□□□□□ -0.3
CYSTM1Q9H1C7 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CYSTM1Q9H1C7 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CYSTM1Q9H1C7 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CYSTM1Q9H1C7 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC13.19□□□□□ -0.3
CYSTM1Q9H1C7 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CYSTM1Q9H1C7 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CYSTM1Q9H1C7 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC13.18□□□□□ -0.3
CYSTM1Q9H1C7 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CYSTM1Q9H1C7 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CYSTM1Q9H1C7 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
CYSTM1Q9H1C7 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CYSTM1Q9H1C7 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CYSTM1Q9H1C7 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC13.18□□□□□ -0.3
CYSTM1Q9H1C7 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC13.18□□□□□ -0.3
CYSTM1Q9H1C7 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC13.18□□□□□ -0.3
CYSTM1Q9H1C7 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CYSTM1Q9H1C7 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC13.18□□□□□ -0.3
CYSTM1Q9H1C7 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
CYSTM1Q9H1C7 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CYSTM1Q9H1C7 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CYSTM1Q9H1C7 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CYSTM1Q9H1C7 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CYSTM1Q9H1C7 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CYSTM1Q9H1C7 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
CYSTM1Q9H1C7 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CYSTM1Q9H1C7 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CYSTM1Q9H1C7 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC13.17□□□□□ -0.3
CYSTM1Q9H1C7 ADM-207ENST00000530439 1839 ntTSL 2 BASIC13.17□□□□□ -0.3
CYSTM1Q9H1C7 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CYSTM1Q9H1C7 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
CYSTM1Q9H1C7 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC13.17□□□□□ -0.3
CYSTM1Q9H1C7 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CYSTM1Q9H1C7 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
CYSTM1Q9H1C7 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC13.17□□□□□ -0.3
CYSTM1Q9H1C7 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
CYSTM1Q9H1C7 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
CYSTM1Q9H1C7 LINC01006-201ENST00000333319 2292 ntBASIC13.16□□□□□ -0.3
CYSTM1Q9H1C7 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
CYSTM1Q9H1C7 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
CYSTM1Q9H1C7 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
CYSTM1Q9H1C7 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CYSTM1Q9H1C7 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms