Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
DDX47Q9H0S4 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC23.34■■□□□ 1.33
DDX47Q9H0S4 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
DDX47Q9H0S4 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
DDX47Q9H0S4 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
DDX47Q9H0S4 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC23.33■■□□□ 1.33
DDX47Q9H0S4 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.33
DDX47Q9H0S4 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC23.33■■□□□ 1.32
DDX47Q9H0S4 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
DDX47Q9H0S4 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC23.33■■□□□ 1.32
DDX47Q9H0S4 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC23.32■■□□□ 1.32
DDX47Q9H0S4 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
DDX47Q9H0S4 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
DDX47Q9H0S4 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC23.32■■□□□ 1.32
DDX47Q9H0S4 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC23.32■■□□□ 1.32
DDX47Q9H0S4 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC23.32■■□□□ 1.32
DDX47Q9H0S4 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
DDX47Q9H0S4 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
DDX47Q9H0S4 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC23.32■■□□□ 1.32
DDX47Q9H0S4 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC23.32■■□□□ 1.32
DDX47Q9H0S4 USP48-205ENST00000421625 2818 ntTSL 2 BASIC23.32■■□□□ 1.32
DDX47Q9H0S4 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
DDX47Q9H0S4 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
DDX47Q9H0S4 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC23.31■■□□□ 1.32
DDX47Q9H0S4 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
DDX47Q9H0S4 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
DDX47Q9H0S4 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
DDX47Q9H0S4 LBH-205ENST00000407930 756 ntTSL 2 BASIC23.31■■□□□ 1.32
DDX47Q9H0S4 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
DDX47Q9H0S4 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
DDX47Q9H0S4 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
DDX47Q9H0S4 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
DDX47Q9H0S4 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
DDX47Q9H0S4 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC23.3■■□□□ 1.32
DDX47Q9H0S4 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
DDX47Q9H0S4 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
DDX47Q9H0S4 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
DDX47Q9H0S4 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC23.3■■□□□ 1.32
DDX47Q9H0S4 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
DDX47Q9H0S4 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
DDX47Q9H0S4 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
DDX47Q9H0S4 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
DDX47Q9H0S4 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
DDX47Q9H0S4 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC23.3■■□□□ 1.32
DDX47Q9H0S4 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
DDX47Q9H0S4 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC23.3■■□□□ 1.32
DDX47Q9H0S4 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC23.3■■□□□ 1.32
DDX47Q9H0S4 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC23.3■■□□□ 1.32
DDX47Q9H0S4 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC23.3■■□□□ 1.32
DDX47Q9H0S4 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
DDX47Q9H0S4 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
DDX47Q9H0S4 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
DDX47Q9H0S4 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC23.29■■□□□ 1.32
DDX47Q9H0S4 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
DDX47Q9H0S4 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
DDX47Q9H0S4 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
DDX47Q9H0S4 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
DDX47Q9H0S4 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC23.29■■□□□ 1.32
DDX47Q9H0S4 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
DDX47Q9H0S4 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC23.29■■□□□ 1.32
DDX47Q9H0S4 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
DDX47Q9H0S4 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
DDX47Q9H0S4 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
DDX47Q9H0S4 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
DDX47Q9H0S4 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
DDX47Q9H0S4 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
DDX47Q9H0S4 KRT18P60-201ENST00000312876 1297 ntBASIC23.28■■□□□ 1.32
DDX47Q9H0S4 RARRES2P2-201ENST00000394842 485 ntBASIC23.28■■□□□ 1.32
DDX47Q9H0S4 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC23.28■■□□□ 1.32
DDX47Q9H0S4 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC23.28■■□□□ 1.32
DDX47Q9H0S4 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
DDX47Q9H0S4 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC23.28■■□□□ 1.32
DDX47Q9H0S4 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC23.28■■□□□ 1.32
DDX47Q9H0S4 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
DDX47Q9H0S4 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
DDX47Q9H0S4 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
DDX47Q9H0S4 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
DDX47Q9H0S4 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
DDX47Q9H0S4 AL353803.4-201ENST00000565882 1934 ntBASIC23.27■■□□□ 1.32
DDX47Q9H0S4 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
DDX47Q9H0S4 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
DDX47Q9H0S4 AC139530.1-201ENST00000575312 1977 ntBASIC23.27■■□□□ 1.32
DDX47Q9H0S4 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
DDX47Q9H0S4 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
DDX47Q9H0S4 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
DDX47Q9H0S4 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
DDX47Q9H0S4 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC23.26■■□□□ 1.31
DDX47Q9H0S4 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
DDX47Q9H0S4 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
DDX47Q9H0S4 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC23.26■■□□□ 1.31
DDX47Q9H0S4 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
DDX47Q9H0S4 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
DDX47Q9H0S4 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
DDX47Q9H0S4 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
DDX47Q9H0S4 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC23.26■■□□□ 1.31
DDX47Q9H0S4 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC23.26■■□□□ 1.31
DDX47Q9H0S4 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
DDX47Q9H0S4 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC23.26■■□□□ 1.31
DDX47Q9H0S4 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
DDX47Q9H0S4 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC23.25■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms