Protein–RNA interactions for Protein: Q9H089

LSG1, Large subunit GTPase 1 homolog, humanhuman

Known RBP Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1Q9H089 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC26.9■■□□□ 1.9
LSG1Q9H089 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC26.9■■□□□ 1.9
LSG1Q9H089 C1orf229-201ENST00000623686 2258 ntBASIC26.9■■□□□ 1.9
LSG1Q9H089 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
LSG1Q9H089 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC26.89■■□□□ 1.9
LSG1Q9H089 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
LSG1Q9H089 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
LSG1Q9H089 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC26.89■■□□□ 1.89
LSG1Q9H089 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC26.88■■□□□ 1.89
LSG1Q9H089 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
LSG1Q9H089 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
LSG1Q9H089 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC26.87■■□□□ 1.89
LSG1Q9H089 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
LSG1Q9H089 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC26.87■■□□□ 1.89
LSG1Q9H089 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC26.87■■□□□ 1.89
LSG1Q9H089 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC26.87■■□□□ 1.89
LSG1Q9H089 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC26.87■■□□□ 1.89
LSG1Q9H089 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC26.87■■□□□ 1.89
LSG1Q9H089 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC26.87■■□□□ 1.89
LSG1Q9H089 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC26.87■■□□□ 1.89
LSG1Q9H089 GCA-201ENST00000233612 1694 ntTSL 2 BASIC26.86■■□□□ 1.89
LSG1Q9H089 TFPT-201ENST00000391757 774 ntTSL 5 BASIC26.86■■□□□ 1.89
LSG1Q9H089 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC26.86■■□□□ 1.89
LSG1Q9H089 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
LSG1Q9H089 ASB1-202ENST00000409297 878 ntTSL 5 BASIC26.86■■□□□ 1.89
LSG1Q9H089 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC26.86■■□□□ 1.89
LSG1Q9H089 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC26.86■■□□□ 1.89
LSG1Q9H089 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC26.86■■□□□ 1.89
LSG1Q9H089 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC26.86■■□□□ 1.89
LSG1Q9H089 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
LSG1Q9H089 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
LSG1Q9H089 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC26.85■■□□□ 1.89
LSG1Q9H089 AC009102.2-201ENST00000606772 1639 ntBASIC26.85■■□□□ 1.89
LSG1Q9H089 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
LSG1Q9H089 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC26.85■■□□□ 1.89
LSG1Q9H089 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC26.84■■□□□ 1.89
LSG1Q9H089 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC26.84■■□□□ 1.89
LSG1Q9H089 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC26.84■■□□□ 1.89
LSG1Q9H089 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
LSG1Q9H089 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
LSG1Q9H089 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC26.83■■□□□ 1.89
LSG1Q9H089 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
LSG1Q9H089 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC26.83■■□□□ 1.89
LSG1Q9H089 GUSBP5-201ENST00000418136 578 ntBASIC26.83■■□□□ 1.89
LSG1Q9H089 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC26.83■■□□□ 1.89
LSG1Q9H089 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC26.83■■□□□ 1.89
LSG1Q9H089 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
LSG1Q9H089 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
LSG1Q9H089 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
LSG1Q9H089 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC26.82■■□□□ 1.88
LSG1Q9H089 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
LSG1Q9H089 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC26.82■■□□□ 1.88
LSG1Q9H089 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC26.82■■□□□ 1.88
LSG1Q9H089 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
LSG1Q9H089 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC26.82■■□□□ 1.88
LSG1Q9H089 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC26.82■■□□□ 1.88
LSG1Q9H089 COMT-203ENST00000403184 2217 ntTSL 2 BASIC26.82■■□□□ 1.88
LSG1Q9H089 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
LSG1Q9H089 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC26.81■■□□□ 1.88
LSG1Q9H089 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC26.81■■□□□ 1.88
LSG1Q9H089 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC26.81■■□□□ 1.88
LSG1Q9H089 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
LSG1Q9H089 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
LSG1Q9H089 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC26.8■■□□□ 1.88
LSG1Q9H089 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
LSG1Q9H089 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC26.8■■□□□ 1.88
LSG1Q9H089 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC26.8■■□□□ 1.88
LSG1Q9H089 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
LSG1Q9H089 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC26.8■■□□□ 1.88
LSG1Q9H089 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC26.8■■□□□ 1.88
LSG1Q9H089 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
LSG1Q9H089 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC26.8■■□□□ 1.88
LSG1Q9H089 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
LSG1Q9H089 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC26.8■■□□□ 1.88
LSG1Q9H089 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
LSG1Q9H089 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC26.79■■□□□ 1.88
LSG1Q9H089 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC26.79■■□□□ 1.88
LSG1Q9H089 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC26.79■■□□□ 1.88
LSG1Q9H089 MIR6724-1-201ENST00000616420 92 ntBASIC26.79■■□□□ 1.88
LSG1Q9H089 MIR6724-2-201ENST00000616483 92 ntBASIC26.79■■□□□ 1.88
LSG1Q9H089 MIR6724-4-201ENST00000617390 92 ntBASIC26.79■■□□□ 1.88
LSG1Q9H089 MIR6724-3-201ENST00000622482 92 ntBASIC26.79■■□□□ 1.88
LSG1Q9H089 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
LSG1Q9H089 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC26.78■■□□□ 1.88
LSG1Q9H089 NKILA-201ENST00000613231 537 ntTSL 4 BASIC26.78■■□□□ 1.88
LSG1Q9H089 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC26.78■■□□□ 1.88
LSG1Q9H089 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
LSG1Q9H089 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC26.78■■□□□ 1.88
LSG1Q9H089 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC26.78■■□□□ 1.88
LSG1Q9H089 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC26.78■■□□□ 1.88
LSG1Q9H089 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
LSG1Q9H089 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
LSG1Q9H089 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC26.77■■□□□ 1.88
LSG1Q9H089 TRIR-205ENST00000592273 783 ntTSL 3 BASIC26.77■■□□□ 1.88
LSG1Q9H089 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC26.77■■□□□ 1.88
LSG1Q9H089 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC26.76■■□□□ 1.88
LSG1Q9H089 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
LSG1Q9H089 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
LSG1Q9H089 FP325331.1-202ENST00000623531 1380 ntBASIC26.76■■□□□ 1.87
LSG1Q9H089 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
Retrieved 100 of 98,524 protein–RNA pairs in 130.4 ms