Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.56■□□□□ 0.88
TRIM2Q9C040 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
TRIM2Q9C040 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRIM2Q9C040 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRIM2Q9C040 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRIM2Q9C040 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRIM2Q9C040 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.55■□□□□ 0.88
TRIM2Q9C040 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRIM2Q9C040 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.55■□□□□ 0.88
TRIM2Q9C040 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC20.55■□□□□ 0.88
TRIM2Q9C040 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC20.55■□□□□ 0.88
TRIM2Q9C040 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
TRIM2Q9C040 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRIM2Q9C040 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRIM2Q9C040 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
TRIM2Q9C040 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRIM2Q9C040 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
TRIM2Q9C040 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TRIM2Q9C040 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRIM2Q9C040 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC20.54■□□□□ 0.88
TRIM2Q9C040 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC20.54■□□□□ 0.88
TRIM2Q9C040 CLTA-210ENST00000540080 989 ntTSL 2 BASIC20.54■□□□□ 0.88
TRIM2Q9C040 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRIM2Q9C040 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRIM2Q9C040 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
TRIM2Q9C040 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRIM2Q9C040 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRIM2Q9C040 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.54■□□□□ 0.88
TRIM2Q9C040 AC005703.6-201ENST00000623265 1329 ntBASIC20.53■□□□□ 0.88
TRIM2Q9C040 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TRIM2Q9C040 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRIM2Q9C040 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
TRIM2Q9C040 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
TRIM2Q9C040 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC20.53■□□□□ 0.88
TRIM2Q9C040 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC20.53■□□□□ 0.88
TRIM2Q9C040 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRIM2Q9C040 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRIM2Q9C040 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TRIM2Q9C040 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TRIM2Q9C040 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRIM2Q9C040 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRIM2Q9C040 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.52■□□□□ 0.88
TRIM2Q9C040 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
TRIM2Q9C040 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRIM2Q9C040 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRIM2Q9C040 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC20.52■□□□□ 0.88
TRIM2Q9C040 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC20.52■□□□□ 0.88
TRIM2Q9C040 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC20.52■□□□□ 0.88
TRIM2Q9C040 KRT125P-201ENST00000546827 989 ntBASIC20.52■□□□□ 0.88
TRIM2Q9C040 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRIM2Q9C040 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.87
TRIM2Q9C040 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
TRIM2Q9C040 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.87
TRIM2Q9C040 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRIM2Q9C040 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRIM2Q9C040 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRIM2Q9C040 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC20.51■□□□□ 0.87
TRIM2Q9C040 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC20.51■□□□□ 0.87
TRIM2Q9C040 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC20.51■□□□□ 0.87
TRIM2Q9C040 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRIM2Q9C040 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRIM2Q9C040 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.5■□□□□ 0.87
TRIM2Q9C040 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.5■□□□□ 0.87
TRIM2Q9C040 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.5■□□□□ 0.87
TRIM2Q9C040 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRIM2Q9C040 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.5■□□□□ 0.87
TRIM2Q9C040 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRIM2Q9C040 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
TRIM2Q9C040 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.5■□□□□ 0.87
TRIM2Q9C040 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.5■□□□□ 0.87
TRIM2Q9C040 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRIM2Q9C040 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.5■□□□□ 0.87
TRIM2Q9C040 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TRIM2Q9C040 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TRIM2Q9C040 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
TRIM2Q9C040 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
TRIM2Q9C040 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
TRIM2Q9C040 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC20.49■□□□□ 0.87
TRIM2Q9C040 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
TRIM2Q9C040 AC092028.1-203ENST00000608262 953 ntBASIC20.49■□□□□ 0.87
TRIM2Q9C040 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC20.49■□□□□ 0.87
TRIM2Q9C040 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
TRIM2Q9C040 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRIM2Q9C040 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TRIM2Q9C040 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
TRIM2Q9C040 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRIM2Q9C040 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
TRIM2Q9C040 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
TRIM2Q9C040 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRIM2Q9C040 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRIM2Q9C040 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.48■□□□□ 0.87
TRIM2Q9C040 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
TRIM2Q9C040 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRIM2Q9C040 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TRIM2Q9C040 AL356441.2-201ENST00000443009 864 ntBASIC20.48■□□□□ 0.87
TRIM2Q9C040 AC131212.1-201ENST00000613771 668 ntBASIC20.48■□□□□ 0.87
TRIM2Q9C040 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC20.48■□□□□ 0.87
TRIM2Q9C040 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRIM2Q9C040 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRIM2Q9C040 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms