Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
LCE3DQ9BYE3 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC6.04□□□□□ -1.44
LCE3DQ9BYE3 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
LCE3DQ9BYE3 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
LCE3DQ9BYE3 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
LCE3DQ9BYE3 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
LCE3DQ9BYE3 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC6.04□□□□□ -1.44
LCE3DQ9BYE3 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
LCE3DQ9BYE3 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC6.04□□□□□ -1.44
LCE3DQ9BYE3 MED17-221ENST00000639724 2317 ntTSL 5 BASIC6.04□□□□□ -1.44
LCE3DQ9BYE3 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
LCE3DQ9BYE3 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
LCE3DQ9BYE3 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC6.04□□□□□ -1.44
LCE3DQ9BYE3 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
LCE3DQ9BYE3 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
LCE3DQ9BYE3 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
LCE3DQ9BYE3 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
LCE3DQ9BYE3 AC242852.2-201ENST00000615738 1807 ntBASIC6.04□□□□□ -1.44
LCE3DQ9BYE3 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC6.04□□□□□ -1.44
LCE3DQ9BYE3 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC6.04□□□□□ -1.44
LCE3DQ9BYE3 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
LCE3DQ9BYE3 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC6.03□□□□□ -1.44
LCE3DQ9BYE3 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
LCE3DQ9BYE3 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
LCE3DQ9BYE3 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC6.03□□□□□ -1.44
LCE3DQ9BYE3 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
LCE3DQ9BYE3 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
LCE3DQ9BYE3 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
LCE3DQ9BYE3 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
LCE3DQ9BYE3 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
LCE3DQ9BYE3 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
LCE3DQ9BYE3 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
LCE3DQ9BYE3 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC6.03□□□□□ -1.44
LCE3DQ9BYE3 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
LCE3DQ9BYE3 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC6.03□□□□□ -1.44
LCE3DQ9BYE3 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
LCE3DQ9BYE3 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
LCE3DQ9BYE3 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
LCE3DQ9BYE3 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
LCE3DQ9BYE3 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
LCE3DQ9BYE3 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC6.03□□□□□ -1.44
LCE3DQ9BYE3 CHML-204ENST00000638121 920 ntTSL 2 BASIC6.03□□□□□ -1.44
LCE3DQ9BYE3 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
LCE3DQ9BYE3 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
LCE3DQ9BYE3 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
LCE3DQ9BYE3 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
LCE3DQ9BYE3 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
LCE3DQ9BYE3 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
LCE3DQ9BYE3 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
LCE3DQ9BYE3 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
LCE3DQ9BYE3 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
LCE3DQ9BYE3 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
LCE3DQ9BYE3 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
LCE3DQ9BYE3 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
LCE3DQ9BYE3 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
LCE3DQ9BYE3 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
LCE3DQ9BYE3 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
LCE3DQ9BYE3 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
LCE3DQ9BYE3 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
LCE3DQ9BYE3 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC6.03□□□□□ -1.44
LCE3DQ9BYE3 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
LCE3DQ9BYE3 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC6.03□□□□□ -1.44
LCE3DQ9BYE3 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC6.02□□□□□ -1.44
LCE3DQ9BYE3 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.44
LCE3DQ9BYE3 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC6.02□□□□□ -1.44
LCE3DQ9BYE3 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
LCE3DQ9BYE3 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
LCE3DQ9BYE3 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC6.02□□□□□ -1.45
LCE3DQ9BYE3 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC6.02□□□□□ -1.45
LCE3DQ9BYE3 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
LCE3DQ9BYE3 AL137060.1-201ENST00000618151 2648 ntBASIC6.02□□□□□ -1.45
LCE3DQ9BYE3 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
LCE3DQ9BYE3 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
LCE3DQ9BYE3 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
LCE3DQ9BYE3 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
LCE3DQ9BYE3 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC6.02□□□□□ -1.45
LCE3DQ9BYE3 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
LCE3DQ9BYE3 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
LCE3DQ9BYE3 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
LCE3DQ9BYE3 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
LCE3DQ9BYE3 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
LCE3DQ9BYE3 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC6.02□□□□□ -1.45
LCE3DQ9BYE3 DUX4L29-201ENST00000425409 679 ntBASIC6.02□□□□□ -1.45
LCE3DQ9BYE3 BOD1-206ENST00000480951 814 ntTSL 2 BASIC6.02□□□□□ -1.45
LCE3DQ9BYE3 CHST11-202ENST00000546689 756 ntTSL 2 BASIC6.02□□□□□ -1.45
LCE3DQ9BYE3 CHST11-203ENST00000547956 936 ntTSL 2 BASIC6.02□□□□□ -1.45
LCE3DQ9BYE3 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC6.02□□□□□ -1.45
LCE3DQ9BYE3 AC044849.2-201ENST00000606596 710 ntBASIC6.02□□□□□ -1.45
LCE3DQ9BYE3 ESRRAP2-201ENST00000418437 1549 ntBASIC6.02□□□□□ -1.45
LCE3DQ9BYE3 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
LCE3DQ9BYE3 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
LCE3DQ9BYE3 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
LCE3DQ9BYE3 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
LCE3DQ9BYE3 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC6.02□□□□□ -1.45
LCE3DQ9BYE3 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
LCE3DQ9BYE3 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC6.02□□□□□ -1.45
LCE3DQ9BYE3 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
LCE3DQ9BYE3 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
LCE3DQ9BYE3 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
LCE3DQ9BYE3 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC6.02□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms