Protein–RNA interactions for Protein: Q9BSG5

RTBDN, Retbindin, humanhuman

Predicted RBP Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTBDNQ9BSG5 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RTBDNQ9BSG5 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RTBDNQ9BSG5 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RTBDNQ9BSG5 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RTBDNQ9BSG5 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RTBDNQ9BSG5 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RTBDNQ9BSG5 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RTBDNQ9BSG5 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RTBDNQ9BSG5 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
RTBDNQ9BSG5 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC18.61■□□□□ 0.57
RTBDNQ9BSG5 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
RTBDNQ9BSG5 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RTBDNQ9BSG5 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RTBDNQ9BSG5 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RTBDNQ9BSG5 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RTBDNQ9BSG5 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC18.6■□□□□ 0.57
RTBDNQ9BSG5 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
RTBDNQ9BSG5 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RTBDNQ9BSG5 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RTBDNQ9BSG5 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC18.6■□□□□ 0.57
RTBDNQ9BSG5 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
RTBDNQ9BSG5 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
RTBDNQ9BSG5 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RTBDNQ9BSG5 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RTBDNQ9BSG5 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC18.59■□□□□ 0.57
RTBDNQ9BSG5 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RTBDNQ9BSG5 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
RTBDNQ9BSG5 AC133552.2-201ENST00000619106 1032 ntBASIC18.59■□□□□ 0.57
RTBDNQ9BSG5 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RTBDNQ9BSG5 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RTBDNQ9BSG5 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RTBDNQ9BSG5 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC18.59■□□□□ 0.57
RTBDNQ9BSG5 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
RTBDNQ9BSG5 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
RTBDNQ9BSG5 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
RTBDNQ9BSG5 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC18.58■□□□□ 0.57
RTBDNQ9BSG5 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
RTBDNQ9BSG5 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
RTBDNQ9BSG5 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
RTBDNQ9BSG5 STK32C-205ENST00000456004 607 ntTSL 2 BASIC18.58■□□□□ 0.56
RTBDNQ9BSG5 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC18.58■□□□□ 0.56
RTBDNQ9BSG5 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
RTBDNQ9BSG5 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC18.58■□□□□ 0.56
RTBDNQ9BSG5 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RTBDNQ9BSG5 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RTBDNQ9BSG5 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
RTBDNQ9BSG5 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RTBDNQ9BSG5 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RTBDNQ9BSG5 FBXW4P1-201ENST00000426721 2239 ntBASIC18.57■□□□□ 0.56
RTBDNQ9BSG5 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RTBDNQ9BSG5 MIR639-201ENST00000384974 98 ntBASIC18.57■□□□□ 0.56
RTBDNQ9BSG5 HES4-202ENST00000428771 1040 ntTSL 2 BASIC18.57■□□□□ 0.56
RTBDNQ9BSG5 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RTBDNQ9BSG5 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RTBDNQ9BSG5 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RTBDNQ9BSG5 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
RTBDNQ9BSG5 AC080038.3-201ENST00000623346 1952 ntBASIC18.57■□□□□ 0.56
RTBDNQ9BSG5 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
RTBDNQ9BSG5 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC18.56■□□□□ 0.56
RTBDNQ9BSG5 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RTBDNQ9BSG5 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC18.56■□□□□ 0.56
RTBDNQ9BSG5 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RTBDNQ9BSG5 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
RTBDNQ9BSG5 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
RTBDNQ9BSG5 AC087393.1-201ENST00000582896 145 ntBASIC18.56■□□□□ 0.56
RTBDNQ9BSG5 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC18.56■□□□□ 0.56
RTBDNQ9BSG5 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
RTBDNQ9BSG5 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC18.56■□□□□ 0.56
RTBDNQ9BSG5 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RTBDNQ9BSG5 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
RTBDNQ9BSG5 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC18.55■□□□□ 0.56
RTBDNQ9BSG5 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
RTBDNQ9BSG5 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC18.55■□□□□ 0.56
RTBDNQ9BSG5 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RTBDNQ9BSG5 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
RTBDNQ9BSG5 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RTBDNQ9BSG5 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC18.55■□□□□ 0.56
RTBDNQ9BSG5 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RTBDNQ9BSG5 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RTBDNQ9BSG5 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC18.55■□□□□ 0.56
RTBDNQ9BSG5 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RTBDNQ9BSG5 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RTBDNQ9BSG5 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC18.55■□□□□ 0.56
RTBDNQ9BSG5 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RTBDNQ9BSG5 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RTBDNQ9BSG5 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
RTBDNQ9BSG5 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RTBDNQ9BSG5 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC18.55■□□□□ 0.56
RTBDNQ9BSG5 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
RTBDNQ9BSG5 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
RTBDNQ9BSG5 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RTBDNQ9BSG5 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC18.55■□□□□ 0.56
RTBDNQ9BSG5 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
RTBDNQ9BSG5 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RTBDNQ9BSG5 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
RTBDNQ9BSG5 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RTBDNQ9BSG5 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
RTBDNQ9BSG5 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RTBDNQ9BSG5 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC18.54■□□□□ 0.56
RTBDNQ9BSG5 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms