Protein–RNA interactions for Protein: Q9BQ83

SLX1A, Structure-specific endonuclease subunit SLX1, humanhuman

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLX1AQ9BQ83 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SLX1AQ9BQ83 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SLX1AQ9BQ83 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
SLX1AQ9BQ83 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
SLX1AQ9BQ83 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SLX1AQ9BQ83 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.78■□□□□ 0.92
SLX1AQ9BQ83 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.78■□□□□ 0.92
SLX1AQ9BQ83 MIR4767-201ENST00000582827 78 ntBASIC20.78■□□□□ 0.92
SLX1AQ9BQ83 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.78■□□□□ 0.92
SLX1AQ9BQ83 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC20.78■□□□□ 0.92
SLX1AQ9BQ83 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SLX1AQ9BQ83 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
SLX1AQ9BQ83 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SLX1AQ9BQ83 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SLX1AQ9BQ83 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
SLX1AQ9BQ83 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
SLX1AQ9BQ83 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SLX1AQ9BQ83 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SLX1AQ9BQ83 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
SLX1AQ9BQ83 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SLX1AQ9BQ83 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SLX1AQ9BQ83 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC20.76■□□□□ 0.91
SLX1AQ9BQ83 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC20.76■□□□□ 0.91
SLX1AQ9BQ83 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.76■□□□□ 0.91
SLX1AQ9BQ83 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC20.76■□□□□ 0.91
SLX1AQ9BQ83 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC20.76■□□□□ 0.91
SLX1AQ9BQ83 AC131274.2-201ENST00000580697 1507 ntBASIC20.76■□□□□ 0.91
SLX1AQ9BQ83 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SLX1AQ9BQ83 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
SLX1AQ9BQ83 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
SLX1AQ9BQ83 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SLX1AQ9BQ83 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SLX1AQ9BQ83 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
SLX1AQ9BQ83 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SLX1AQ9BQ83 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC20.76■□□□□ 0.91
SLX1AQ9BQ83 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
SLX1AQ9BQ83 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SLX1AQ9BQ83 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SLX1AQ9BQ83 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.75■□□□□ 0.91
SLX1AQ9BQ83 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20.75■□□□□ 0.91
SLX1AQ9BQ83 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SLX1AQ9BQ83 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SLX1AQ9BQ83 SERBP1P1-201ENST00000396021 1160 ntBASIC20.75■□□□□ 0.91
SLX1AQ9BQ83 MIR6821-201ENST00000617625 74 ntBASIC20.75■□□□□ 0.91
SLX1AQ9BQ83 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC20.75■□□□□ 0.91
SLX1AQ9BQ83 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.75■□□□□ 0.91
SLX1AQ9BQ83 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SLX1AQ9BQ83 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SLX1AQ9BQ83 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
SLX1AQ9BQ83 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC20.74■□□□□ 0.91
SLX1AQ9BQ83 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.74■□□□□ 0.91
SLX1AQ9BQ83 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC20.74■□□□□ 0.91
SLX1AQ9BQ83 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC20.74■□□□□ 0.91
SLX1AQ9BQ83 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
SLX1AQ9BQ83 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20.74■□□□□ 0.91
SLX1AQ9BQ83 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
SLX1AQ9BQ83 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SLX1AQ9BQ83 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SLX1AQ9BQ83 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SLX1AQ9BQ83 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
SLX1AQ9BQ83 RASA4CP-201ENST00000424092 1398 ntBASIC20.73■□□□□ 0.91
SLX1AQ9BQ83 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SLX1AQ9BQ83 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC20.73■□□□□ 0.91
SLX1AQ9BQ83 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SLX1AQ9BQ83 AC097381.1-201ENST00000429019 1296 ntBASIC20.73■□□□□ 0.91
SLX1AQ9BQ83 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SLX1AQ9BQ83 STK32C-205ENST00000456004 607 ntTSL 2 BASIC20.73■□□□□ 0.91
SLX1AQ9BQ83 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.73■□□□□ 0.91
SLX1AQ9BQ83 STOX2-205ENST00000513034 807 ntTSL 3 BASIC20.73■□□□□ 0.91
SLX1AQ9BQ83 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.73■□□□□ 0.91
SLX1AQ9BQ83 AL138724.1-201ENST00000606771 1088 ntBASIC20.73■□□□□ 0.91
SLX1AQ9BQ83 AC011298.3-201ENST00000615796 283 ntBASIC20.73■□□□□ 0.91
SLX1AQ9BQ83 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
SLX1AQ9BQ83 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SLX1AQ9BQ83 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
SLX1AQ9BQ83 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SLX1AQ9BQ83 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC20.72■□□□□ 0.91
SLX1AQ9BQ83 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC20.72■□□□□ 0.91
SLX1AQ9BQ83 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SLX1AQ9BQ83 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SLX1AQ9BQ83 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
SLX1AQ9BQ83 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC20.72■□□□□ 0.91
SLX1AQ9BQ83 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SLX1AQ9BQ83 AC027682.1-201ENST00000562846 899 ntBASIC20.72■□□□□ 0.91
SLX1AQ9BQ83 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC20.72■□□□□ 0.91
SLX1AQ9BQ83 CA15P2-201ENST00000611168 834 ntBASIC20.72■□□□□ 0.91
SLX1AQ9BQ83 ANKRD20A6P-201ENST00000618763 204 ntBASIC20.72■□□□□ 0.91
SLX1AQ9BQ83 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SLX1AQ9BQ83 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.72■□□□□ 0.91
SLX1AQ9BQ83 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SLX1AQ9BQ83 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
SLX1AQ9BQ83 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SLX1AQ9BQ83 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SLX1AQ9BQ83 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SLX1AQ9BQ83 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.71■□□□□ 0.91
SLX1AQ9BQ83 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.71■□□□□ 0.91
SLX1AQ9BQ83 AC099791.2-201ENST00000605725 427 ntBASIC20.71■□□□□ 0.91
SLX1AQ9BQ83 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SLX1AQ9BQ83 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
SLX1AQ9BQ83 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.7■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms