Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 AC068473.5-201ENST00000616428 2072 ntBASIC21.18■□□□□ 0.98
BBS4Q96RK4 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
BBS4Q96RK4 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
BBS4Q96RK4 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC21.18■□□□□ 0.98
BBS4Q96RK4 C9orf163-202ENST00000624034 2573 ntBASIC21.18■□□□□ 0.98
BBS4Q96RK4 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
BBS4Q96RK4 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
BBS4Q96RK4 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
BBS4Q96RK4 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
BBS4Q96RK4 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC21.17■□□□□ 0.98
BBS4Q96RK4 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
BBS4Q96RK4 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
BBS4Q96RK4 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
BBS4Q96RK4 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC21.17■□□□□ 0.98
BBS4Q96RK4 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
BBS4Q96RK4 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC21.17■□□□□ 0.98
BBS4Q96RK4 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
BBS4Q96RK4 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
BBS4Q96RK4 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC21.16■□□□□ 0.98
BBS4Q96RK4 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
BBS4Q96RK4 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
BBS4Q96RK4 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
BBS4Q96RK4 CD72-202ENST00000378430 585 ntTSL 3 BASIC21.16■□□□□ 0.98
BBS4Q96RK4 AL035685.1-201ENST00000636663 812 ntBASIC21.16■□□□□ 0.98
BBS4Q96RK4 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
BBS4Q96RK4 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
BBS4Q96RK4 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC21.15■□□□□ 0.98
BBS4Q96RK4 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
BBS4Q96RK4 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
BBS4Q96RK4 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
BBS4Q96RK4 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
BBS4Q96RK4 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
BBS4Q96RK4 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
BBS4Q96RK4 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
BBS4Q96RK4 EXOG-217ENST00000630638 197 ntTSL 5 BASIC21.15■□□□□ 0.98
BBS4Q96RK4 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
BBS4Q96RK4 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
BBS4Q96RK4 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
BBS4Q96RK4 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC21.15■□□□□ 0.98
BBS4Q96RK4 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
BBS4Q96RK4 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
BBS4Q96RK4 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
BBS4Q96RK4 OR2A1-AS1-204ENST00000470435 602 ntBASIC21.14■□□□□ 0.97
BBS4Q96RK4 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
BBS4Q96RK4 AC133561.1-201ENST00000568600 2415 ntBASIC21.14■□□□□ 0.97
BBS4Q96RK4 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
BBS4Q96RK4 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
BBS4Q96RK4 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
BBS4Q96RK4 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
BBS4Q96RK4 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
BBS4Q96RK4 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
BBS4Q96RK4 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
BBS4Q96RK4 HES6-204ENST00000409182 863 ntTSL 2 BASIC21.13■□□□□ 0.97
BBS4Q96RK4 CREM-229ENST00000474362 1030 ntTSL 2 BASIC21.13■□□□□ 0.97
BBS4Q96RK4 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC21.13■□□□□ 0.97
BBS4Q96RK4 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
BBS4Q96RK4 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
BBS4Q96RK4 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC21.13■□□□□ 0.97
BBS4Q96RK4 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC21.13■□□□□ 0.97
BBS4Q96RK4 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC21.13■□□□□ 0.97
BBS4Q96RK4 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
BBS4Q96RK4 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC21.13■□□□□ 0.97
BBS4Q96RK4 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
BBS4Q96RK4 TFPT-201ENST00000391757 774 ntTSL 5 BASIC21.12■□□□□ 0.97
BBS4Q96RK4 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
BBS4Q96RK4 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
BBS4Q96RK4 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
BBS4Q96RK4 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
BBS4Q96RK4 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC21.12■□□□□ 0.97
BBS4Q96RK4 AC012676.1-201ENST00000574705 1949 ntBASIC21.12■□□□□ 0.97
BBS4Q96RK4 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC21.12■□□□□ 0.97
BBS4Q96RK4 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
BBS4Q96RK4 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
BBS4Q96RK4 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
BBS4Q96RK4 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC21.11■□□□□ 0.97
BBS4Q96RK4 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
BBS4Q96RK4 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
BBS4Q96RK4 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
BBS4Q96RK4 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
BBS4Q96RK4 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC21.1■□□□□ 0.97
BBS4Q96RK4 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
BBS4Q96RK4 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
BBS4Q96RK4 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC21.1■□□□□ 0.97
BBS4Q96RK4 LSM4-201ENST00000252816 986 ntTSL 2 BASIC21.1■□□□□ 0.97
BBS4Q96RK4 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC21.1■□□□□ 0.97
BBS4Q96RK4 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
BBS4Q96RK4 UNC93B8-201ENST00000511903 705 ntBASIC21.1■□□□□ 0.97
BBS4Q96RK4 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC21.1■□□□□ 0.97
BBS4Q96RK4 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
BBS4Q96RK4 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
BBS4Q96RK4 AC144652.1-201ENST00000609974 1624 ntBASIC21.1■□□□□ 0.97
BBS4Q96RK4 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
BBS4Q96RK4 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
BBS4Q96RK4 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
BBS4Q96RK4 AL353803.4-201ENST00000565882 1934 ntBASIC21.1■□□□□ 0.97
BBS4Q96RK4 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
BBS4Q96RK4 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
BBS4Q96RK4 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
BBS4Q96RK4 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
BBS4Q96RK4 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms