Protein–RNA interactions for Protein: Q96N23

CFAP54, Cilia- and flagella-associated protein 54, humanhuman

Predictions only

Length 3,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54Q96N23 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC22.25■■□□□ 1.15
CFAP54Q96N23 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CFAP54Q96N23 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC22.24■■□□□ 1.15
CFAP54Q96N23 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
CFAP54Q96N23 GTSE1-AS1-202ENST00000623117 1518 ntBASIC22.24■■□□□ 1.15
CFAP54Q96N23 PFKL-212ENST00000628044 129 ntTSL 3 BASIC22.24■■□□□ 1.15
CFAP54Q96N23 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CFAP54Q96N23 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CFAP54Q96N23 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC22.24■■□□□ 1.15
CFAP54Q96N23 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
CFAP54Q96N23 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC22.24■■□□□ 1.15
CFAP54Q96N23 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC22.24■■□□□ 1.15
CFAP54Q96N23 KRT18P29-201ENST00000397031 1267 ntBASIC22.24■■□□□ 1.15
CFAP54Q96N23 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CFAP54Q96N23 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC22.24■■□□□ 1.15
CFAP54Q96N23 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC22.23■■□□□ 1.15
CFAP54Q96N23 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CFAP54Q96N23 MDK-213ENST00000617138 635 ntTSL 2 BASIC22.23■■□□□ 1.15
CFAP54Q96N23 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC22.22■■□□□ 1.15
CFAP54Q96N23 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC22.22■■□□□ 1.15
CFAP54Q96N23 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
CFAP54Q96N23 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC22.22■■□□□ 1.15
CFAP54Q96N23 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
CFAP54Q96N23 VGF-203ENST00000611537 1622 ntTSL 5 BASIC22.22■■□□□ 1.15
CFAP54Q96N23 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
CFAP54Q96N23 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
CFAP54Q96N23 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC22.22■■□□□ 1.15
CFAP54Q96N23 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
CFAP54Q96N23 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
CFAP54Q96N23 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CFAP54Q96N23 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
CFAP54Q96N23 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
CFAP54Q96N23 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC22.22■■□□□ 1.15
CFAP54Q96N23 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC22.22■■□□□ 1.15
CFAP54Q96N23 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
CFAP54Q96N23 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC22.21■■□□□ 1.15
CFAP54Q96N23 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC22.21■■□□□ 1.15
CFAP54Q96N23 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
CFAP54Q96N23 AC011767.1-201ENST00000617410 1153 ntBASIC22.21■■□□□ 1.15
CFAP54Q96N23 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC22.21■■□□□ 1.15
CFAP54Q96N23 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC22.21■■□□□ 1.15
CFAP54Q96N23 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
CFAP54Q96N23 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CFAP54Q96N23 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
CFAP54Q96N23 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC22.2■■□□□ 1.14
CFAP54Q96N23 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CFAP54Q96N23 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CFAP54Q96N23 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC22.2■■□□□ 1.14
CFAP54Q96N23 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC22.2■■□□□ 1.14
CFAP54Q96N23 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
CFAP54Q96N23 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC22.2■■□□□ 1.14
CFAP54Q96N23 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CFAP54Q96N23 RGMA-211ENST00000557420 989 ntTSL 3 BASIC22.19■■□□□ 1.14
CFAP54Q96N23 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC22.19■■□□□ 1.14
CFAP54Q96N23 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
CFAP54Q96N23 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CFAP54Q96N23 DUSP5P2-201ENST00000426873 1033 ntBASIC22.19■■□□□ 1.14
CFAP54Q96N23 AP006294.2-201ENST00000641667 209 ntBASIC22.19■■□□□ 1.14
CFAP54Q96N23 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CFAP54Q96N23 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC22.18■■□□□ 1.14
CFAP54Q96N23 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
CFAP54Q96N23 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
CFAP54Q96N23 METTL15-202ENST00000403099 795 ntTSL 5 BASIC22.18■■□□□ 1.14
CFAP54Q96N23 ECEL1P3-201ENST00000427961 737 ntBASIC22.18■■□□□ 1.14
CFAP54Q96N23 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CFAP54Q96N23 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC22.17■■□□□ 1.14
CFAP54Q96N23 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC22.17■■□□□ 1.14
CFAP54Q96N23 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC22.17■■□□□ 1.14
CFAP54Q96N23 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
CFAP54Q96N23 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
CFAP54Q96N23 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC22.17■■□□□ 1.14
CFAP54Q96N23 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
CFAP54Q96N23 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
CFAP54Q96N23 SHD-204ENST00000599689 1729 ntTSL 5 BASIC22.16■■□□□ 1.14
CFAP54Q96N23 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC22.16■■□□□ 1.14
CFAP54Q96N23 AC091060.1-201ENST00000623524 1766 ntBASIC22.16■■□□□ 1.14
CFAP54Q96N23 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CFAP54Q96N23 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CFAP54Q96N23 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
CFAP54Q96N23 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC22.16■■□□□ 1.14
CFAP54Q96N23 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
CFAP54Q96N23 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CFAP54Q96N23 OAS3-207ENST00000551007 998 ntTSL 2 BASIC22.15■■□□□ 1.14
CFAP54Q96N23 AC092118.2-201ENST00000613495 667 ntBASIC22.15■■□□□ 1.14
CFAP54Q96N23 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CFAP54Q96N23 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC22.15■■□□□ 1.14
CFAP54Q96N23 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC22.15■■□□□ 1.14
CFAP54Q96N23 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CFAP54Q96N23 AC142472.1-201ENST00000612013 1741 ntBASIC22.15■■□□□ 1.14
CFAP54Q96N23 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
CFAP54Q96N23 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CFAP54Q96N23 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC22.15■■□□□ 1.14
CFAP54Q96N23 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC22.15■■□□□ 1.14
CFAP54Q96N23 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC22.15■■□□□ 1.14
CFAP54Q96N23 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC22.14■■□□□ 1.14
CFAP54Q96N23 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.14
CFAP54Q96N23 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
CFAP54Q96N23 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CFAP54Q96N23 FAM210CP-201ENST00000445714 574 ntBASIC22.14■■□□□ 1.13
CFAP54Q96N23 TSPY6P-201ENST00000448518 926 ntBASIC22.14■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms