Protein–RNA interactions for Protein: Q93008

USP9X, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, humanhuman

Predicted RBP Predictions only

Length 2,570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9XQ93008 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
USP9XQ93008 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC19.85■□□□□ 0.77
USP9XQ93008 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
USP9XQ93008 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
USP9XQ93008 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
USP9XQ93008 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC19.85■□□□□ 0.77
USP9XQ93008 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC19.84■□□□□ 0.77
USP9XQ93008 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
USP9XQ93008 AL022069.1-201ENST00000568025 1636 ntBASIC19.84■□□□□ 0.77
USP9XQ93008 PRORSD1P-201ENST00000295112 541 ntBASIC19.84■□□□□ 0.77
USP9XQ93008 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC19.84■□□□□ 0.77
USP9XQ93008 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC19.84■□□□□ 0.77
USP9XQ93008 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC19.84■□□□□ 0.77
USP9XQ93008 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC19.84■□□□□ 0.77
USP9XQ93008 SHD-204ENST00000599689 1729 ntTSL 5 BASIC19.84■□□□□ 0.77
USP9XQ93008 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC19.84■□□□□ 0.77
USP9XQ93008 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC19.84■□□□□ 0.77
USP9XQ93008 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
USP9XQ93008 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
USP9XQ93008 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
USP9XQ93008 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC19.84■□□□□ 0.77
USP9XQ93008 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
USP9XQ93008 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
USP9XQ93008 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.77
USP9XQ93008 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC19.83■□□□□ 0.77
USP9XQ93008 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
USP9XQ93008 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC19.83■□□□□ 0.77
USP9XQ93008 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
USP9XQ93008 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
USP9XQ93008 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
USP9XQ93008 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
USP9XQ93008 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
USP9XQ93008 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
USP9XQ93008 AL050303.2-201ENST00000619798 666 ntBASIC19.83■□□□□ 0.76
USP9XQ93008 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
USP9XQ93008 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
USP9XQ93008 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC19.82■□□□□ 0.76
USP9XQ93008 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
USP9XQ93008 AP004607.4-201ENST00000530158 1459 ntBASIC19.82■□□□□ 0.76
USP9XQ93008 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
USP9XQ93008 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC19.82■□□□□ 0.76
USP9XQ93008 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC19.82■□□□□ 0.76
USP9XQ93008 MDK-213ENST00000617138 635 ntTSL 2 BASIC19.82■□□□□ 0.76
USP9XQ93008 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
USP9XQ93008 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
USP9XQ93008 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
USP9XQ93008 AL138781.1-201ENST00000566567 1274 ntBASIC19.82■□□□□ 0.76
USP9XQ93008 TBCB-214ENST00000629269 413 ntTSL 5 BASIC19.82■□□□□ 0.76
USP9XQ93008 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
USP9XQ93008 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
USP9XQ93008 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
USP9XQ93008 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
USP9XQ93008 METTL15-202ENST00000403099 795 ntTSL 5 BASIC19.81■□□□□ 0.76
USP9XQ93008 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
USP9XQ93008 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
USP9XQ93008 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
USP9XQ93008 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.8■□□□□ 0.76
USP9XQ93008 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
USP9XQ93008 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
USP9XQ93008 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC19.8■□□□□ 0.76
USP9XQ93008 KRT19P1-201ENST00000405746 1186 ntBASIC19.8■□□□□ 0.76
USP9XQ93008 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
USP9XQ93008 AC083906.2-201ENST00000511578 360 ntBASIC19.8■□□□□ 0.76
USP9XQ93008 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
USP9XQ93008 AC087239.1-201ENST00000622671 572 ntBASIC19.8■□□□□ 0.76
USP9XQ93008 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC19.8■□□□□ 0.76
USP9XQ93008 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
USP9XQ93008 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
USP9XQ93008 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
USP9XQ93008 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
USP9XQ93008 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
USP9XQ93008 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC19.79■□□□□ 0.76
USP9XQ93008 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC19.79■□□□□ 0.76
USP9XQ93008 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
USP9XQ93008 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
USP9XQ93008 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC19.78■□□□□ 0.76
USP9XQ93008 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC19.78■□□□□ 0.76
USP9XQ93008 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC19.78■□□□□ 0.76
USP9XQ93008 AC010525.1-201ENST00000585559 441 ntBASIC19.78■□□□□ 0.76
USP9XQ93008 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
USP9XQ93008 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC19.78■□□□□ 0.76
USP9XQ93008 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC19.78■□□□□ 0.76
USP9XQ93008 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
USP9XQ93008 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
USP9XQ93008 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
USP9XQ93008 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC19.77■□□□□ 0.76
USP9XQ93008 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC19.77■□□□□ 0.76
USP9XQ93008 AC098934.4-201ENST00000564127 592 ntBASIC19.77■□□□□ 0.76
USP9XQ93008 USF2-207ENST00000595068 1612 ntTSL 5 BASIC19.77■□□□□ 0.76
USP9XQ93008 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
USP9XQ93008 AC133637.1-201ENST00000624115 1537 ntBASIC19.77■□□□□ 0.75
USP9XQ93008 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
USP9XQ93008 METTL26-203ENST00000397664 604 ntTSL 2 BASIC19.77■□□□□ 0.75
USP9XQ93008 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.75
USP9XQ93008 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
USP9XQ93008 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC19.76■□□□□ 0.75
USP9XQ93008 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
USP9XQ93008 SLC7A5P2-201ENST00000553010 536 ntBASIC19.76■□□□□ 0.75
USP9XQ93008 CD37-213ENST00000598095 1598 ntTSL 2 BASIC19.76■□□□□ 0.75
USP9XQ93008 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms