Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
SNED1Q8TER0 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC27.66■■■□□ 2.02
SNED1Q8TER0 CEBPA-AS1-201ENST00000592982 2198 ntBASIC27.66■■■□□ 2.02
SNED1Q8TER0 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC27.66■■■□□ 2.02
SNED1Q8TER0 HLA-L-209ENST00000420110 1011 ntBASIC27.66■■■□□ 2.02
SNED1Q8TER0 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC27.66■■■□□ 2.02
SNED1Q8TER0 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC27.66■■■□□ 2.02
SNED1Q8TER0 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
SNED1Q8TER0 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
SNED1Q8TER0 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
SNED1Q8TER0 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC27.65■■■□□ 2.02
SNED1Q8TER0 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC27.65■■■□□ 2.02
SNED1Q8TER0 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC27.65■■■□□ 2.02
SNED1Q8TER0 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC27.65■■■□□ 2.02
SNED1Q8TER0 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC27.65■■■□□ 2.02
SNED1Q8TER0 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC27.65■■■□□ 2.02
SNED1Q8TER0 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
SNED1Q8TER0 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC27.64■■■□□ 2.02
SNED1Q8TER0 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC27.64■■■□□ 2.02
SNED1Q8TER0 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC27.64■■■□□ 2.02
SNED1Q8TER0 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC27.64■■■□□ 2.02
SNED1Q8TER0 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC27.64■■■□□ 2.02
SNED1Q8TER0 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC27.64■■■□□ 2.02
SNED1Q8TER0 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC27.63■■■□□ 2.01
SNED1Q8TER0 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
SNED1Q8TER0 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC27.63■■■□□ 2.01
SNED1Q8TER0 AC006015.1-201ENST00000429970 570 ntBASIC27.63■■■□□ 2.01
SNED1Q8TER0 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC27.63■■■□□ 2.01
SNED1Q8TER0 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC27.63■■■□□ 2.01
SNED1Q8TER0 LINC02228-203ENST00000641970 1355 ntBASIC27.63■■■□□ 2.01
SNED1Q8TER0 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC27.63■■■□□ 2.01
SNED1Q8TER0 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC27.63■■■□□ 2.01
SNED1Q8TER0 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC27.63■■■□□ 2.01
SNED1Q8TER0 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
SNED1Q8TER0 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC27.62■■■□□ 2.01
SNED1Q8TER0 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC27.62■■■□□ 2.01
SNED1Q8TER0 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC27.62■■■□□ 2.01
SNED1Q8TER0 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC27.62■■■□□ 2.01
SNED1Q8TER0 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC27.62■■■□□ 2.01
SNED1Q8TER0 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC27.62■■■□□ 2.01
SNED1Q8TER0 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
SNED1Q8TER0 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
SNED1Q8TER0 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
SNED1Q8TER0 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC27.61■■■□□ 2.01
SNED1Q8TER0 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
SNED1Q8TER0 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC27.61■■■□□ 2.01
SNED1Q8TER0 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
SNED1Q8TER0 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC27.6■■■□□ 2.01
SNED1Q8TER0 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC27.6■■■□□ 2.01
SNED1Q8TER0 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC27.6■■■□□ 2.01
SNED1Q8TER0 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC27.6■■■□□ 2.01
SNED1Q8TER0 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
SNED1Q8TER0 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
SNED1Q8TER0 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC27.6■■■□□ 2.01
SNED1Q8TER0 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC27.6■■■□□ 2.01
SNED1Q8TER0 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC27.6■■■□□ 2.01
SNED1Q8TER0 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC27.6■■■□□ 2.01
SNED1Q8TER0 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
SNED1Q8TER0 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC27.59■■■□□ 2.01
SNED1Q8TER0 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC27.59■■■□□ 2.01
SNED1Q8TER0 GXYLT1P2-201ENST00000433312 1230 ntBASIC27.59■■■□□ 2.01
SNED1Q8TER0 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC27.59■■■□□ 2.01
SNED1Q8TER0 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
SNED1Q8TER0 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC27.59■■■□□ 2.01
SNED1Q8TER0 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC27.59■■■□□ 2.01
SNED1Q8TER0 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
SNED1Q8TER0 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
SNED1Q8TER0 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC27.58■■■□□ 2.01
SNED1Q8TER0 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC27.58■■■□□ 2.01
SNED1Q8TER0 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC27.58■■■□□ 2.01
SNED1Q8TER0 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC27.58■■■□□ 2.01
SNED1Q8TER0 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
SNED1Q8TER0 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
SNED1Q8TER0 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
SNED1Q8TER0 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC27.58■■■□□ 2.01
SNED1Q8TER0 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC27.58■■■□□ 2.01
SNED1Q8TER0 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC27.58■■■□□ 2
SNED1Q8TER0 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC27.58■■■□□ 2
SNED1Q8TER0 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC27.58■■■□□ 2
SNED1Q8TER0 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2
SNED1Q8TER0 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
SNED1Q8TER0 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC27.57■■■□□ 2
SNED1Q8TER0 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC27.57■■■□□ 2
SNED1Q8TER0 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC27.57■■■□□ 2
SNED1Q8TER0 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
SNED1Q8TER0 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC27.56■■■□□ 2
SNED1Q8TER0 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
SNED1Q8TER0 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC27.56■■■□□ 2
SNED1Q8TER0 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC27.56■■■□□ 2
SNED1Q8TER0 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC27.56■■■□□ 2
SNED1Q8TER0 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
SNED1Q8TER0 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC27.56■■■□□ 2
SNED1Q8TER0 LHPP-203ENST00000392757 840 ntTSL 3 BASIC27.56■■■□□ 2
SNED1Q8TER0 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC27.56■■■□□ 2
SNED1Q8TER0 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC27.55■■■□□ 2
SNED1Q8TER0 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC27.55■■■□□ 2
SNED1Q8TER0 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC27.55■■■□□ 2
SNED1Q8TER0 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC27.55■■■□□ 2
SNED1Q8TER0 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC27.55■■■□□ 2
SNED1Q8TER0 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC27.55■■■□□ 2
Retrieved 100 of 98,524 protein–RNA pairs in 13.1 ms