Protein–RNA interactions for Protein: Q8TDI8

TMC1, Transmembrane channel-like protein 1, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1Q8TDI8 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
TMC1Q8TDI8 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
TMC1Q8TDI8 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC31.19■■■□□ 2.58
TMC1Q8TDI8 AC008764.7-201ENST00000593779 1081 ntBASIC31.19■■■□□ 2.58
TMC1Q8TDI8 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC31.19■■■□□ 2.58
TMC1Q8TDI8 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC31.19■■■□□ 2.58
TMC1Q8TDI8 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC31.19■■■□□ 2.58
TMC1Q8TDI8 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
TMC1Q8TDI8 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
TMC1Q8TDI8 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC31.19■■■□□ 2.58
TMC1Q8TDI8 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC31.18■■■□□ 2.58
TMC1Q8TDI8 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC31.18■■■□□ 2.58
TMC1Q8TDI8 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
TMC1Q8TDI8 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
TMC1Q8TDI8 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
TMC1Q8TDI8 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC31.18■■■□□ 2.58
TMC1Q8TDI8 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC31.18■■■□□ 2.58
TMC1Q8TDI8 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
TMC1Q8TDI8 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC31.17■■■□□ 2.58
TMC1Q8TDI8 AC091305.1-201ENST00000479476 895 ntBASIC31.17■■■□□ 2.58
TMC1Q8TDI8 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC31.17■■■□□ 2.58
TMC1Q8TDI8 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC31.17■■■□□ 2.58
TMC1Q8TDI8 pRNA.6-201ENST00000610482 90 ntBASIC31.17■■■□□ 2.58
TMC1Q8TDI8 pRNA.5-201ENST00000612139 90 ntBASIC31.17■■■□□ 2.58
TMC1Q8TDI8 pRNA.11-201ENST00000618423 90 ntBASIC31.17■■■□□ 2.58
TMC1Q8TDI8 pRNA.13-201ENST00000619112 90 ntBASIC31.17■■■□□ 2.58
TMC1Q8TDI8 AC136469.2-201ENST00000623944 1028 ntBASIC31.17■■■□□ 2.58
TMC1Q8TDI8 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
TMC1Q8TDI8 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC31.17■■■□□ 2.58
TMC1Q8TDI8 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
TMC1Q8TDI8 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC31.16■■■□□ 2.58
TMC1Q8TDI8 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
TMC1Q8TDI8 ASB1-202ENST00000409297 878 ntTSL 5 BASIC31.16■■■□□ 2.58
TMC1Q8TDI8 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
TMC1Q8TDI8 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC31.16■■■□□ 2.58
TMC1Q8TDI8 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
TMC1Q8TDI8 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
TMC1Q8TDI8 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC31.15■■■□□ 2.58
TMC1Q8TDI8 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC31.15■■■□□ 2.58
TMC1Q8TDI8 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC31.15■■■□□ 2.58
TMC1Q8TDI8 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
TMC1Q8TDI8 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC31.15■■■□□ 2.58
TMC1Q8TDI8 LGR4-203ENST00000480977 492 ntTSL 2 BASIC31.15■■■□□ 2.58
TMC1Q8TDI8 CA15P2-201ENST00000611168 834 ntBASIC31.15■■■□□ 2.58
TMC1Q8TDI8 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
TMC1Q8TDI8 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC31.14■■■□□ 2.58
TMC1Q8TDI8 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC31.14■■■□□ 2.58
TMC1Q8TDI8 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
TMC1Q8TDI8 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
TMC1Q8TDI8 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC31.14■■■□□ 2.58
TMC1Q8TDI8 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC31.14■■■□□ 2.58
TMC1Q8TDI8 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.57
TMC1Q8TDI8 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC31.14■■■□□ 2.57
TMC1Q8TDI8 GTSE1-AS1-202ENST00000623117 1518 ntBASIC31.14■■■□□ 2.57
TMC1Q8TDI8 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC31.13■■■□□ 2.57
TMC1Q8TDI8 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC31.13■■■□□ 2.57
TMC1Q8TDI8 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC31.13■■■□□ 2.57
TMC1Q8TDI8 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
TMC1Q8TDI8 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC31.13■■■□□ 2.57
TMC1Q8TDI8 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC31.13■■■□□ 2.57
TMC1Q8TDI8 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC31.13■■■□□ 2.57
TMC1Q8TDI8 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
TMC1Q8TDI8 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC31.13■■■□□ 2.57
TMC1Q8TDI8 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC31.12■■■□□ 2.57
TMC1Q8TDI8 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC31.12■■■□□ 2.57
TMC1Q8TDI8 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
TMC1Q8TDI8 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC31.12■■■□□ 2.57
TMC1Q8TDI8 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC31.12■■■□□ 2.57
TMC1Q8TDI8 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
TMC1Q8TDI8 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC31.12■■■□□ 2.57
TMC1Q8TDI8 RASA4CP-201ENST00000424092 1398 ntBASIC31.12■■■□□ 2.57
TMC1Q8TDI8 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC31.12■■■□□ 2.57
TMC1Q8TDI8 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC31.12■■■□□ 2.57
TMC1Q8TDI8 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC31.12■■■□□ 2.57
TMC1Q8TDI8 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
TMC1Q8TDI8 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
TMC1Q8TDI8 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
TMC1Q8TDI8 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC31.11■■■□□ 2.57
TMC1Q8TDI8 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC31.11■■■□□ 2.57
TMC1Q8TDI8 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC31.11■■■□□ 2.57
TMC1Q8TDI8 AC099791.1-201ENST00000416440 715 ntBASIC31.11■■■□□ 2.57
TMC1Q8TDI8 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC31.11■■■□□ 2.57
TMC1Q8TDI8 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC31.11■■■□□ 2.57
TMC1Q8TDI8 AC027682.1-201ENST00000562846 899 ntBASIC31.11■■■□□ 2.57
TMC1Q8TDI8 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC31.11■■■□□ 2.57
TMC1Q8TDI8 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC31.11■■■□□ 2.57
TMC1Q8TDI8 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
TMC1Q8TDI8 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
TMC1Q8TDI8 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
TMC1Q8TDI8 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
TMC1Q8TDI8 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC31.1■■■□□ 2.57
TMC1Q8TDI8 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
TMC1Q8TDI8 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC31.1■■■□□ 2.57
TMC1Q8TDI8 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC31.1■■■□□ 2.57
TMC1Q8TDI8 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
TMC1Q8TDI8 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
TMC1Q8TDI8 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC31.09■■■□□ 2.57
TMC1Q8TDI8 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC31.09■■■□□ 2.57
TMC1Q8TDI8 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
TMC1Q8TDI8 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms