Protein–RNA interactions for Protein: Q8TB92

HMGCLL1, 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1Q8TB92 TFPT-201ENST00000391757 774 ntTSL 5 BASIC22.06■■□□□ 1.12
HMGCLL1Q8TB92 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
HMGCLL1Q8TB92 GRAMD4P7-201ENST00000578182 1232 ntBASIC22.06■■□□□ 1.12
HMGCLL1Q8TB92 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC22.06■■□□□ 1.12
HMGCLL1Q8TB92 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
HMGCLL1Q8TB92 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
HMGCLL1Q8TB92 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
HMGCLL1Q8TB92 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
HMGCLL1Q8TB92 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
HMGCLL1Q8TB92 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
HMGCLL1Q8TB92 AC092068.2-201ENST00000590491 1708 ntBASIC22.05■■□□□ 1.12
HMGCLL1Q8TB92 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC22.04■■□□□ 1.12
HMGCLL1Q8TB92 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
HMGCLL1Q8TB92 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
HMGCLL1Q8TB92 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC22.04■■□□□ 1.12
HMGCLL1Q8TB92 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC22.04■■□□□ 1.12
HMGCLL1Q8TB92 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC22.04■■□□□ 1.12
HMGCLL1Q8TB92 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
HMGCLL1Q8TB92 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
HMGCLL1Q8TB92 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC22.03■■□□□ 1.12
HMGCLL1Q8TB92 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
HMGCLL1Q8TB92 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
HMGCLL1Q8TB92 C1orf229-201ENST00000623686 2258 ntBASIC22.03■■□□□ 1.12
HMGCLL1Q8TB92 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
HMGCLL1Q8TB92 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
HMGCLL1Q8TB92 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC22.03■■□□□ 1.12
HMGCLL1Q8TB92 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
HMGCLL1Q8TB92 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
HMGCLL1Q8TB92 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
HMGCLL1Q8TB92 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
HMGCLL1Q8TB92 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC22.03■■□□□ 1.12
HMGCLL1Q8TB92 STK25-234ENST00000535007 2459 ntTSL 2 BASIC22.02■■□□□ 1.12
HMGCLL1Q8TB92 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
HMGCLL1Q8TB92 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC22.02■■□□□ 1.12
HMGCLL1Q8TB92 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
HMGCLL1Q8TB92 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
HMGCLL1Q8TB92 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.11
HMGCLL1Q8TB92 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC22.01■■□□□ 1.11
HMGCLL1Q8TB92 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
HMGCLL1Q8TB92 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
HMGCLL1Q8TB92 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC22.01■■□□□ 1.11
HMGCLL1Q8TB92 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC22.01■■□□□ 1.11
HMGCLL1Q8TB92 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC22.01■■□□□ 1.11
HMGCLL1Q8TB92 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
HMGCLL1Q8TB92 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
HMGCLL1Q8TB92 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC22.01■■□□□ 1.11
HMGCLL1Q8TB92 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
HMGCLL1Q8TB92 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
HMGCLL1Q8TB92 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
HMGCLL1Q8TB92 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
HMGCLL1Q8TB92 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
HMGCLL1Q8TB92 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC22.01■■□□□ 1.11
HMGCLL1Q8TB92 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
HMGCLL1Q8TB92 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
HMGCLL1Q8TB92 TERT-206ENST00000508104 2486 ntTSL 5 BASIC22■■□□□ 1.11
HMGCLL1Q8TB92 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
HMGCLL1Q8TB92 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
HMGCLL1Q8TB92 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
HMGCLL1Q8TB92 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC21.99■■□□□ 1.11
HMGCLL1Q8TB92 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
HMGCLL1Q8TB92 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
HMGCLL1Q8TB92 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
HMGCLL1Q8TB92 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
HMGCLL1Q8TB92 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC21.99■■□□□ 1.11
HMGCLL1Q8TB92 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC21.99■■□□□ 1.11
HMGCLL1Q8TB92 MIR3621-201ENST00000580529 85 ntBASIC21.99■■□□□ 1.11
HMGCLL1Q8TB92 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC21.99■■□□□ 1.11
HMGCLL1Q8TB92 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
HMGCLL1Q8TB92 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
HMGCLL1Q8TB92 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
HMGCLL1Q8TB92 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
HMGCLL1Q8TB92 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
HMGCLL1Q8TB92 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
HMGCLL1Q8TB92 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
HMGCLL1Q8TB92 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
HMGCLL1Q8TB92 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
HMGCLL1Q8TB92 H19-210ENST00000439725 1929 ntTSL 2 BASIC21.98■■□□□ 1.11
HMGCLL1Q8TB92 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
HMGCLL1Q8TB92 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC21.98■■□□□ 1.11
HMGCLL1Q8TB92 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
HMGCLL1Q8TB92 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
HMGCLL1Q8TB92 AL117332.1-201ENST00000622628 974 ntBASIC21.98■■□□□ 1.11
HMGCLL1Q8TB92 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC21.98■■□□□ 1.11
HMGCLL1Q8TB92 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
HMGCLL1Q8TB92 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
HMGCLL1Q8TB92 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC21.98■■□□□ 1.11
HMGCLL1Q8TB92 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
HMGCLL1Q8TB92 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
HMGCLL1Q8TB92 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
HMGCLL1Q8TB92 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC21.97■■□□□ 1.11
HMGCLL1Q8TB92 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
HMGCLL1Q8TB92 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
HMGCLL1Q8TB92 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
HMGCLL1Q8TB92 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
HMGCLL1Q8TB92 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
HMGCLL1Q8TB92 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC21.96■■□□□ 1.11
HMGCLL1Q8TB92 LINC00565-201ENST00000562710 2331 ntBASIC21.96■■□□□ 1.11
HMGCLL1Q8TB92 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC21.96■■□□□ 1.11
HMGCLL1Q8TB92 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
HMGCLL1Q8TB92 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC21.96■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms