Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
RTL9Q8NET4 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC27.82■■■□□ 2.04
RTL9Q8NET4 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
RTL9Q8NET4 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
RTL9Q8NET4 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC27.81■■■□□ 2.04
RTL9Q8NET4 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
RTL9Q8NET4 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC27.81■■■□□ 2.04
RTL9Q8NET4 OR2I1P-207ENST00000453522 948 ntBASIC27.81■■■□□ 2.04
RTL9Q8NET4 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC27.81■■■□□ 2.04
RTL9Q8NET4 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC27.81■■■□□ 2.04
RTL9Q8NET4 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
RTL9Q8NET4 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC27.8■■■□□ 2.04
RTL9Q8NET4 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC27.8■■■□□ 2.04
RTL9Q8NET4 AC144652.1-201ENST00000609974 1624 ntBASIC27.8■■■□□ 2.04
RTL9Q8NET4 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
RTL9Q8NET4 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC27.8■■■□□ 2.04
RTL9Q8NET4 LINC00543-201ENST00000567234 1845 ntBASIC27.8■■■□□ 2.04
RTL9Q8NET4 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC27.8■■■□□ 2.04
RTL9Q8NET4 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC27.8■■■□□ 2.04
RTL9Q8NET4 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
RTL9Q8NET4 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
RTL9Q8NET4 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC27.79■■■□□ 2.04
RTL9Q8NET4 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
RTL9Q8NET4 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
RTL9Q8NET4 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
RTL9Q8NET4 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC27.78■■■□□ 2.04
RTL9Q8NET4 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC27.78■■■□□ 2.04
RTL9Q8NET4 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
RTL9Q8NET4 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
RTL9Q8NET4 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
RTL9Q8NET4 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
RTL9Q8NET4 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC27.78■■■□□ 2.04
RTL9Q8NET4 AICDA-202ENST00000537228 667 ntTSL 5 BASIC27.78■■■□□ 2.04
RTL9Q8NET4 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC27.78■■■□□ 2.04
RTL9Q8NET4 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC27.78■■■□□ 2.04
RTL9Q8NET4 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
RTL9Q8NET4 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC27.78■■■□□ 2.04
RTL9Q8NET4 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
RTL9Q8NET4 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
RTL9Q8NET4 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
RTL9Q8NET4 IGHV3-19-201ENST00000521488 291 ntBASIC27.77■■■□□ 2.04
RTL9Q8NET4 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC27.77■■■□□ 2.04
RTL9Q8NET4 AC126544.1-201ENST00000580842 1059 ntBASIC27.77■■■□□ 2.04
RTL9Q8NET4 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
RTL9Q8NET4 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
RTL9Q8NET4 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC27.77■■■□□ 2.04
RTL9Q8NET4 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
RTL9Q8NET4 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC27.77■■■□□ 2.04
RTL9Q8NET4 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.04
RTL9Q8NET4 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC27.76■■■□□ 2.03
RTL9Q8NET4 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
RTL9Q8NET4 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC27.76■■■□□ 2.03
RTL9Q8NET4 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
RTL9Q8NET4 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC27.76■■■□□ 2.03
RTL9Q8NET4 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC27.76■■■□□ 2.03
RTL9Q8NET4 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
RTL9Q8NET4 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC27.76■■■□□ 2.03
RTL9Q8NET4 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC27.76■■■□□ 2.03
RTL9Q8NET4 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC27.76■■■□□ 2.03
RTL9Q8NET4 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC27.75■■■□□ 2.03
RTL9Q8NET4 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
RTL9Q8NET4 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC27.75■■■□□ 2.03
RTL9Q8NET4 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
RTL9Q8NET4 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC27.75■■■□□ 2.03
RTL9Q8NET4 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
RTL9Q8NET4 SP2-202ENST00000613139 908 ntTSL 5 BASIC27.75■■■□□ 2.03
RTL9Q8NET4 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC27.75■■■□□ 2.03
RTL9Q8NET4 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC27.75■■■□□ 2.03
RTL9Q8NET4 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
RTL9Q8NET4 AK1-201ENST00000223836 736 ntTSL 3 BASIC27.74■■■□□ 2.03
RTL9Q8NET4 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC27.74■■■□□ 2.03
RTL9Q8NET4 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC27.74■■■□□ 2.03
RTL9Q8NET4 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
RTL9Q8NET4 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
RTL9Q8NET4 TSPY26P-201ENST00000476365 1326 ntBASIC27.74■■■□□ 2.03
RTL9Q8NET4 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC27.74■■■□□ 2.03
RTL9Q8NET4 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
RTL9Q8NET4 SHD-204ENST00000599689 1729 ntTSL 5 BASIC27.74■■■□□ 2.03
RTL9Q8NET4 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC27.74■■■□□ 2.03
RTL9Q8NET4 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC27.73■■■□□ 2.03
RTL9Q8NET4 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC27.73■■■□□ 2.03
RTL9Q8NET4 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC27.73■■■□□ 2.03
RTL9Q8NET4 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC27.73■■■□□ 2.03
RTL9Q8NET4 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC27.73■■■□□ 2.03
RTL9Q8NET4 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC27.73■■■□□ 2.03
RTL9Q8NET4 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC27.73■■■□□ 2.03
RTL9Q8NET4 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC27.73■■■□□ 2.03
RTL9Q8NET4 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
RTL9Q8NET4 LINC01529-204ENST00000636474 1715 ntBASIC27.72■■■□□ 2.03
RTL9Q8NET4 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC27.72■■■□□ 2.03
RTL9Q8NET4 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC27.72■■■□□ 2.03
RTL9Q8NET4 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC27.72■■■□□ 2.03
RTL9Q8NET4 AC010525.1-201ENST00000585559 441 ntBASIC27.72■■■□□ 2.03
RTL9Q8NET4 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC27.72■■■□□ 2.03
RTL9Q8NET4 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC27.72■■■□□ 2.03
RTL9Q8NET4 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC27.71■■■□□ 2.03
RTL9Q8NET4 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC27.71■■■□□ 2.03
RTL9Q8NET4 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
RTL9Q8NET4 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC27.71■■■□□ 2.03
RTL9Q8NET4 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms