Protein–RNA interactions for Protein: Q8NAV1

PRPF38A, Pre-mRNA-splicing factor 38A, humanhuman

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38AQ8NAV1 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC25.95■■□□□ 1.74
PRPF38AQ8NAV1 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
PRPF38AQ8NAV1 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC25.95■■□□□ 1.74
PRPF38AQ8NAV1 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC25.95■■□□□ 1.74
PRPF38AQ8NAV1 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC25.94■■□□□ 1.74
PRPF38AQ8NAV1 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC25.94■■□□□ 1.74
PRPF38AQ8NAV1 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC25.94■■□□□ 1.74
PRPF38AQ8NAV1 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC25.94■■□□□ 1.74
PRPF38AQ8NAV1 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC25.94■■□□□ 1.74
PRPF38AQ8NAV1 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC25.94■■□□□ 1.74
PRPF38AQ8NAV1 AC126544.1-201ENST00000580842 1059 ntBASIC25.94■■□□□ 1.74
PRPF38AQ8NAV1 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC25.94■■□□□ 1.74
PRPF38AQ8NAV1 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC25.94■■□□□ 1.74
PRPF38AQ8NAV1 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
PRPF38AQ8NAV1 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC25.94■■□□□ 1.74
PRPF38AQ8NAV1 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
PRPF38AQ8NAV1 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC25.93■■□□□ 1.74
PRPF38AQ8NAV1 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC25.93■■□□□ 1.74
PRPF38AQ8NAV1 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
PRPF38AQ8NAV1 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
PRPF38AQ8NAV1 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
PRPF38AQ8NAV1 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
PRPF38AQ8NAV1 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC25.93■■□□□ 1.74
PRPF38AQ8NAV1 DUX4L4-201ENST00000566884 1269 ntBASIC25.93■■□□□ 1.74
PRPF38AQ8NAV1 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC25.93■■□□□ 1.74
PRPF38AQ8NAV1 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
PRPF38AQ8NAV1 AC133637.1-201ENST00000624115 1537 ntBASIC25.93■■□□□ 1.74
PRPF38AQ8NAV1 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC25.93■■□□□ 1.74
PRPF38AQ8NAV1 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC25.92■■□□□ 1.74
PRPF38AQ8NAV1 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
PRPF38AQ8NAV1 JTB-203ENST00000368589 1216 ntTSL 2 BASIC25.92■■□□□ 1.74
PRPF38AQ8NAV1 SLC47A1P1-202ENST00000449666 945 ntBASIC25.92■■□□□ 1.74
PRPF38AQ8NAV1 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC25.92■■□□□ 1.74
PRPF38AQ8NAV1 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC25.92■■□□□ 1.74
PRPF38AQ8NAV1 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC25.92■■□□□ 1.74
PRPF38AQ8NAV1 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC25.91■■□□□ 1.74
PRPF38AQ8NAV1 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
PRPF38AQ8NAV1 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC25.91■■□□□ 1.74
PRPF38AQ8NAV1 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
PRPF38AQ8NAV1 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
PRPF38AQ8NAV1 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC25.91■■□□□ 1.74
PRPF38AQ8NAV1 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC25.91■■□□□ 1.74
PRPF38AQ8NAV1 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC25.91■■□□□ 1.74
PRPF38AQ8NAV1 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
PRPF38AQ8NAV1 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC25.91■■□□□ 1.74
PRPF38AQ8NAV1 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
PRPF38AQ8NAV1 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
PRPF38AQ8NAV1 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC25.9■■□□□ 1.74
PRPF38AQ8NAV1 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC25.9■■□□□ 1.74
PRPF38AQ8NAV1 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC25.9■■□□□ 1.74
PRPF38AQ8NAV1 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC25.9■■□□□ 1.74
PRPF38AQ8NAV1 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
PRPF38AQ8NAV1 LINC00543-201ENST00000567234 1845 ntBASIC25.9■■□□□ 1.74
PRPF38AQ8NAV1 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC25.9■■□□□ 1.74
PRPF38AQ8NAV1 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
PRPF38AQ8NAV1 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
PRPF38AQ8NAV1 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
PRPF38AQ8NAV1 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
PRPF38AQ8NAV1 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
PRPF38AQ8NAV1 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC25.89■■□□□ 1.74
PRPF38AQ8NAV1 AC144652.1-201ENST00000609974 1624 ntBASIC25.89■■□□□ 1.74
PRPF38AQ8NAV1 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
PRPF38AQ8NAV1 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC25.89■■□□□ 1.74
PRPF38AQ8NAV1 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC25.89■■□□□ 1.74
PRPF38AQ8NAV1 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC25.89■■□□□ 1.74
PRPF38AQ8NAV1 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC25.89■■□□□ 1.73
PRPF38AQ8NAV1 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
PRPF38AQ8NAV1 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
PRPF38AQ8NAV1 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
PRPF38AQ8NAV1 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
PRPF38AQ8NAV1 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
PRPF38AQ8NAV1 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC25.88■■□□□ 1.73
PRPF38AQ8NAV1 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
PRPF38AQ8NAV1 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
PRPF38AQ8NAV1 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
PRPF38AQ8NAV1 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC25.88■■□□□ 1.73
PRPF38AQ8NAV1 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC25.88■■□□□ 1.73
PRPF38AQ8NAV1 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC25.88■■□□□ 1.73
PRPF38AQ8NAV1 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC25.88■■□□□ 1.73
PRPF38AQ8NAV1 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC25.88■■□□□ 1.73
PRPF38AQ8NAV1 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC25.88■■□□□ 1.73
PRPF38AQ8NAV1 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC25.87■■□□□ 1.73
PRPF38AQ8NAV1 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
PRPF38AQ8NAV1 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC25.87■■□□□ 1.73
PRPF38AQ8NAV1 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
PRPF38AQ8NAV1 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC25.87■■□□□ 1.73
PRPF38AQ8NAV1 AC087623.3-201ENST00000607047 1098 ntBASIC25.87■■□□□ 1.73
PRPF38AQ8NAV1 AC092666.2-201ENST00000613287 246 ntBASIC25.87■■□□□ 1.73
PRPF38AQ8NAV1 LINC01529-204ENST00000636474 1715 ntBASIC25.87■■□□□ 1.73
PRPF38AQ8NAV1 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
PRPF38AQ8NAV1 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
PRPF38AQ8NAV1 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC25.87■■□□□ 1.73
PRPF38AQ8NAV1 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC25.86■■□□□ 1.73
PRPF38AQ8NAV1 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC25.86■■□□□ 1.73
PRPF38AQ8NAV1 SHD-204ENST00000599689 1729 ntTSL 5 BASIC25.86■■□□□ 1.73
PRPF38AQ8NAV1 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC25.86■■□□□ 1.73
PRPF38AQ8NAV1 LINC01124-201ENST00000409786 2117 ntBASIC25.86■■□□□ 1.73
PRPF38AQ8NAV1 AICDA-202ENST00000537228 667 ntTSL 5 BASIC25.86■■□□□ 1.73
PRPF38AQ8NAV1 PLD4-205ENST00000553861 667 ntTSL 2 BASIC25.86■■□□□ 1.73
PRPF38AQ8NAV1 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms