Protein–RNA interactions for Protein: Q8N9Z9

LMNTD1, Lamin tail domain-containing protein 1, humanhuman

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNTD1Q8N9Z9 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
LMNTD1Q8N9Z9 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
LMNTD1Q8N9Z9 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
LMNTD1Q8N9Z9 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
LMNTD1Q8N9Z9 AC006455.2-201ENST00000429931 906 ntBASIC21.77■■□□□ 1.08
LMNTD1Q8N9Z9 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC21.77■■□□□ 1.08
LMNTD1Q8N9Z9 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
LMNTD1Q8N9Z9 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC21.77■■□□□ 1.08
LMNTD1Q8N9Z9 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
LMNTD1Q8N9Z9 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
LMNTD1Q8N9Z9 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC21.77■■□□□ 1.07
LMNTD1Q8N9Z9 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.07
LMNTD1Q8N9Z9 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
LMNTD1Q8N9Z9 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
LMNTD1Q8N9Z9 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC21.76■■□□□ 1.07
LMNTD1Q8N9Z9 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
LMNTD1Q8N9Z9 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC21.76■■□□□ 1.07
LMNTD1Q8N9Z9 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
LMNTD1Q8N9Z9 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC21.76■■□□□ 1.07
LMNTD1Q8N9Z9 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC21.76■■□□□ 1.07
LMNTD1Q8N9Z9 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
LMNTD1Q8N9Z9 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
LMNTD1Q8N9Z9 GATM-206ENST00000558336 1522 ntTSL 2 BASIC21.75■■□□□ 1.07
LMNTD1Q8N9Z9 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC21.75■■□□□ 1.07
LMNTD1Q8N9Z9 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
LMNTD1Q8N9Z9 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
LMNTD1Q8N9Z9 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
LMNTD1Q8N9Z9 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
LMNTD1Q8N9Z9 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
LMNTD1Q8N9Z9 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
LMNTD1Q8N9Z9 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
LMNTD1Q8N9Z9 AC099791.2-201ENST00000605725 427 ntBASIC21.75■■□□□ 1.07
LMNTD1Q8N9Z9 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
LMNTD1Q8N9Z9 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
LMNTD1Q8N9Z9 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
LMNTD1Q8N9Z9 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC21.74■■□□□ 1.07
LMNTD1Q8N9Z9 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
LMNTD1Q8N9Z9 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
LMNTD1Q8N9Z9 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
LMNTD1Q8N9Z9 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC21.74■■□□□ 1.07
LMNTD1Q8N9Z9 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
LMNTD1Q8N9Z9 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
LMNTD1Q8N9Z9 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
LMNTD1Q8N9Z9 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC21.73■■□□□ 1.07
LMNTD1Q8N9Z9 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC21.73■■□□□ 1.07
LMNTD1Q8N9Z9 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC21.73■■□□□ 1.07
LMNTD1Q8N9Z9 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
LMNTD1Q8N9Z9 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
LMNTD1Q8N9Z9 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
LMNTD1Q8N9Z9 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
LMNTD1Q8N9Z9 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC21.73■■□□□ 1.07
LMNTD1Q8N9Z9 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
LMNTD1Q8N9Z9 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
LMNTD1Q8N9Z9 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC21.72■■□□□ 1.07
LMNTD1Q8N9Z9 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LMNTD1Q8N9Z9 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
LMNTD1Q8N9Z9 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
LMNTD1Q8N9Z9 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
LMNTD1Q8N9Z9 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC21.72■■□□□ 1.07
LMNTD1Q8N9Z9 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
LMNTD1Q8N9Z9 AL353803.4-201ENST00000565882 1934 ntBASIC21.71■■□□□ 1.07
LMNTD1Q8N9Z9 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
LMNTD1Q8N9Z9 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
LMNTD1Q8N9Z9 MTURN-203ENST00000409688 843 ntTSL 2 BASIC21.71■■□□□ 1.07
LMNTD1Q8N9Z9 SRD5A1P1-201ENST00000442297 786 ntBASIC21.71■■□□□ 1.07
LMNTD1Q8N9Z9 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC21.71■■□□□ 1.07
LMNTD1Q8N9Z9 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
LMNTD1Q8N9Z9 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
LMNTD1Q8N9Z9 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
LMNTD1Q8N9Z9 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC21.7■■□□□ 1.07
LMNTD1Q8N9Z9 NFE2L3P1-201ENST00000588207 1959 ntBASIC21.7■■□□□ 1.07
LMNTD1Q8N9Z9 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
LMNTD1Q8N9Z9 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC21.7■■□□□ 1.06
LMNTD1Q8N9Z9 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC21.7■■□□□ 1.06
LMNTD1Q8N9Z9 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
LMNTD1Q8N9Z9 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
LMNTD1Q8N9Z9 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
LMNTD1Q8N9Z9 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
LMNTD1Q8N9Z9 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
LMNTD1Q8N9Z9 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
LMNTD1Q8N9Z9 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
LMNTD1Q8N9Z9 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC21.7■■□□□ 1.06
LMNTD1Q8N9Z9 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC21.7■■□□□ 1.06
LMNTD1Q8N9Z9 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC21.7■■□□□ 1.06
LMNTD1Q8N9Z9 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
LMNTD1Q8N9Z9 AC144652.1-201ENST00000609974 1624 ntBASIC21.69■■□□□ 1.06
LMNTD1Q8N9Z9 VGF-203ENST00000611537 1622 ntTSL 5 BASIC21.69■■□□□ 1.06
LMNTD1Q8N9Z9 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC21.69■■□□□ 1.06
LMNTD1Q8N9Z9 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21.69■■□□□ 1.06
LMNTD1Q8N9Z9 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
LMNTD1Q8N9Z9 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
LMNTD1Q8N9Z9 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
LMNTD1Q8N9Z9 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
LMNTD1Q8N9Z9 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC21.69■■□□□ 1.06
LMNTD1Q8N9Z9 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
LMNTD1Q8N9Z9 ME2-208ENST00000638937 2471 ntTSL 5 BASIC21.69■■□□□ 1.06
LMNTD1Q8N9Z9 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC21.69■■□□□ 1.06
LMNTD1Q8N9Z9 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
LMNTD1Q8N9Z9 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
LMNTD1Q8N9Z9 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms