Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC71LQ8N9Z2 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC71LQ8N9Z2 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC71LQ8N9Z2 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC71LQ8N9Z2 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC71LQ8N9Z2 AC009831.1-201ENST00000580420 1582 ntBASIC18.63■□□□□ 0.57
CCDC71LQ8N9Z2 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC18.63■□□□□ 0.57
CCDC71LQ8N9Z2 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC71LQ8N9Z2 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CCDC71LQ8N9Z2 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC71LQ8N9Z2 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC71LQ8N9Z2 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC71LQ8N9Z2 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC71LQ8N9Z2 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC71LQ8N9Z2 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC71LQ8N9Z2 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC71LQ8N9Z2 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC71LQ8N9Z2 COMT-203ENST00000403184 2217 ntTSL 2 BASIC18.62■□□□□ 0.57
CCDC71LQ8N9Z2 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC71LQ8N9Z2 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
CCDC71LQ8N9Z2 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC18.61■□□□□ 0.57
CCDC71LQ8N9Z2 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC18.61■□□□□ 0.57
CCDC71LQ8N9Z2 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC18.61■□□□□ 0.57
CCDC71LQ8N9Z2 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC71LQ8N9Z2 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC71LQ8N9Z2 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC71LQ8N9Z2 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
CCDC71LQ8N9Z2 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC71LQ8N9Z2 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
CCDC71LQ8N9Z2 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC71LQ8N9Z2 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC71LQ8N9Z2 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC71LQ8N9Z2 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC71LQ8N9Z2 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC18.6■□□□□ 0.57
CCDC71LQ8N9Z2 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC18.6■□□□□ 0.57
CCDC71LQ8N9Z2 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC71LQ8N9Z2 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC71LQ8N9Z2 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC71LQ8N9Z2 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC18.6■□□□□ 0.57
CCDC71LQ8N9Z2 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC71LQ8N9Z2 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC18.59■□□□□ 0.57
CCDC71LQ8N9Z2 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC71LQ8N9Z2 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
CCDC71LQ8N9Z2 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
CCDC71LQ8N9Z2 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
CCDC71LQ8N9Z2 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC71LQ8N9Z2 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC71LQ8N9Z2 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC71LQ8N9Z2 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC71LQ8N9Z2 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC71LQ8N9Z2 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC71LQ8N9Z2 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC71LQ8N9Z2 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC71LQ8N9Z2 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
CCDC71LQ8N9Z2 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CCDC71LQ8N9Z2 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
CCDC71LQ8N9Z2 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC18.59■□□□□ 0.57
CCDC71LQ8N9Z2 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
CCDC71LQ8N9Z2 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC71LQ8N9Z2 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC71LQ8N9Z2 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC71LQ8N9Z2 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CCDC71LQ8N9Z2 WWC2-AS2-201ENST00000578387 2183 ntBASIC18.58■□□□□ 0.57
CCDC71LQ8N9Z2 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CCDC71LQ8N9Z2 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC18.58■□□□□ 0.57
CCDC71LQ8N9Z2 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CCDC71LQ8N9Z2 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC18.58■□□□□ 0.56
CCDC71LQ8N9Z2 AC087393.1-201ENST00000582896 145 ntBASIC18.58■□□□□ 0.56
CCDC71LQ8N9Z2 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC18.58■□□□□ 0.56
CCDC71LQ8N9Z2 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CCDC71LQ8N9Z2 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CCDC71LQ8N9Z2 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CCDC71LQ8N9Z2 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC18.58■□□□□ 0.56
CCDC71LQ8N9Z2 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
CCDC71LQ8N9Z2 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC18.57■□□□□ 0.56
CCDC71LQ8N9Z2 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC71LQ8N9Z2 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC71LQ8N9Z2 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC71LQ8N9Z2 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC71LQ8N9Z2 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC71LQ8N9Z2 MIR7108-201ENST00000614319 87 ntBASIC18.57■□□□□ 0.56
CCDC71LQ8N9Z2 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC71LQ8N9Z2 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC71LQ8N9Z2 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC71LQ8N9Z2 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC18.57■□□□□ 0.56
CCDC71LQ8N9Z2 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC71LQ8N9Z2 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC71LQ8N9Z2 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC71LQ8N9Z2 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC71LQ8N9Z2 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC71LQ8N9Z2 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC71LQ8N9Z2 GPX1-201ENST00000419349 1106 ntBASIC18.56■□□□□ 0.56
CCDC71LQ8N9Z2 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC71LQ8N9Z2 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CCDC71LQ8N9Z2 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC18.56■□□□□ 0.56
CCDC71LQ8N9Z2 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC71LQ8N9Z2 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC71LQ8N9Z2 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC71LQ8N9Z2 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC18.55■□□□□ 0.56
CCDC71LQ8N9Z2 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 126.8 ms