Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
PCDH20Q8N6Y1 SF1-220ENST00000626028 704 ntTSL 2 BASIC22.84■■□□□ 1.25
PCDH20Q8N6Y1 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
PCDH20Q8N6Y1 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC22.84■■□□□ 1.25
PCDH20Q8N6Y1 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
PCDH20Q8N6Y1 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
PCDH20Q8N6Y1 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
PCDH20Q8N6Y1 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
PCDH20Q8N6Y1 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
PCDH20Q8N6Y1 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
PCDH20Q8N6Y1 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
PCDH20Q8N6Y1 SYT6-210ENST00000641643 1587 ntBASIC22.83■■□□□ 1.25
PCDH20Q8N6Y1 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC22.83■■□□□ 1.24
PCDH20Q8N6Y1 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
PCDH20Q8N6Y1 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
PCDH20Q8N6Y1 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC22.82■■□□□ 1.24
PCDH20Q8N6Y1 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
PCDH20Q8N6Y1 MIR638-201ENST00000385237 100 ntBASIC22.82■■□□□ 1.24
PCDH20Q8N6Y1 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
PCDH20Q8N6Y1 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC22.82■■□□□ 1.24
PCDH20Q8N6Y1 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC22.82■■□□□ 1.24
PCDH20Q8N6Y1 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
PCDH20Q8N6Y1 AL136162.1-201ENST00000607711 1078 ntBASIC22.82■■□□□ 1.24
PCDH20Q8N6Y1 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
PCDH20Q8N6Y1 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
PCDH20Q8N6Y1 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
PCDH20Q8N6Y1 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
PCDH20Q8N6Y1 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
PCDH20Q8N6Y1 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
PCDH20Q8N6Y1 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC22.81■■□□□ 1.24
PCDH20Q8N6Y1 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC22.81■■□□□ 1.24
PCDH20Q8N6Y1 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC22.81■■□□□ 1.24
PCDH20Q8N6Y1 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC22.81■■□□□ 1.24
PCDH20Q8N6Y1 AC133561.4-201ENST00000566112 224 ntBASIC22.81■■□□□ 1.24
PCDH20Q8N6Y1 AC106739.1-201ENST00000617035 715 ntBASIC22.81■■□□□ 1.24
PCDH20Q8N6Y1 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
PCDH20Q8N6Y1 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
PCDH20Q8N6Y1 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
PCDH20Q8N6Y1 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC22.81■■□□□ 1.24
PCDH20Q8N6Y1 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
PCDH20Q8N6Y1 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
PCDH20Q8N6Y1 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
PCDH20Q8N6Y1 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC22.8■■□□□ 1.24
PCDH20Q8N6Y1 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC22.8■■□□□ 1.24
PCDH20Q8N6Y1 PBX2P1-201ENST00000493219 1291 ntBASIC22.8■■□□□ 1.24
PCDH20Q8N6Y1 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC22.8■■□□□ 1.24
PCDH20Q8N6Y1 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC22.8■■□□□ 1.24
PCDH20Q8N6Y1 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC22.8■■□□□ 1.24
PCDH20Q8N6Y1 AC009086.3-201ENST00000623486 1008 ntBASIC22.8■■□□□ 1.24
PCDH20Q8N6Y1 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC22.8■■□□□ 1.24
PCDH20Q8N6Y1 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC22.8■■□□□ 1.24
PCDH20Q8N6Y1 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC22.8■■□□□ 1.24
PCDH20Q8N6Y1 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
PCDH20Q8N6Y1 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC22.8■■□□□ 1.24
PCDH20Q8N6Y1 AC135279.3-201ENST00000610945 1311 ntBASIC22.8■■□□□ 1.24
PCDH20Q8N6Y1 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
PCDH20Q8N6Y1 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC22.79■■□□□ 1.24
PCDH20Q8N6Y1 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC22.79■■□□□ 1.24
PCDH20Q8N6Y1 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
PCDH20Q8N6Y1 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
PCDH20Q8N6Y1 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC22.79■■□□□ 1.24
PCDH20Q8N6Y1 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC22.79■■□□□ 1.24
PCDH20Q8N6Y1 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC22.79■■□□□ 1.24
PCDH20Q8N6Y1 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
PCDH20Q8N6Y1 AL138724.1-201ENST00000606771 1088 ntBASIC22.79■■□□□ 1.24
PCDH20Q8N6Y1 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC22.79■■□□□ 1.24
PCDH20Q8N6Y1 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
PCDH20Q8N6Y1 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC22.79■■□□□ 1.24
PCDH20Q8N6Y1 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC22.79■■□□□ 1.24
PCDH20Q8N6Y1 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
PCDH20Q8N6Y1 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC22.78■■□□□ 1.24
PCDH20Q8N6Y1 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
PCDH20Q8N6Y1 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC22.78■■□□□ 1.24
PCDH20Q8N6Y1 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC22.78■■□□□ 1.24
PCDH20Q8N6Y1 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC22.78■■□□□ 1.24
PCDH20Q8N6Y1 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
PCDH20Q8N6Y1 SERBP1P1-201ENST00000396021 1160 ntBASIC22.78■■□□□ 1.24
PCDH20Q8N6Y1 ABCB10P4-201ENST00000566803 2184 ntBASIC22.78■■□□□ 1.24
PCDH20Q8N6Y1 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
PCDH20Q8N6Y1 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC22.78■■□□□ 1.24
PCDH20Q8N6Y1 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC22.78■■□□□ 1.24
PCDH20Q8N6Y1 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
PCDH20Q8N6Y1 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC22.77■■□□□ 1.24
PCDH20Q8N6Y1 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
PCDH20Q8N6Y1 ASB1-202ENST00000409297 878 ntTSL 5 BASIC22.77■■□□□ 1.24
PCDH20Q8N6Y1 PTCHD3P2-201ENST00000424937 1205 ntBASIC22.77■■□□□ 1.24
PCDH20Q8N6Y1 AC024257.2-201ENST00000549699 147 ntBASIC22.77■■□□□ 1.24
PCDH20Q8N6Y1 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
PCDH20Q8N6Y1 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC22.77■■□□□ 1.24
PCDH20Q8N6Y1 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
PCDH20Q8N6Y1 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
PCDH20Q8N6Y1 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC22.77■■□□□ 1.23
PCDH20Q8N6Y1 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC22.76■■□□□ 1.23
PCDH20Q8N6Y1 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
PCDH20Q8N6Y1 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
PCDH20Q8N6Y1 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
PCDH20Q8N6Y1 AC006455.2-201ENST00000429931 906 ntBASIC22.76■■□□□ 1.23
PCDH20Q8N6Y1 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC22.76■■□□□ 1.23
PCDH20Q8N6Y1 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC22.76■■□□□ 1.23
PCDH20Q8N6Y1 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms