Protein–RNA interactions for Protein: Q8N584

TTC39C, Tetratricopeptide repeat protein 39C, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39CQ8N584 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
TTC39CQ8N584 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
TTC39CQ8N584 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
TTC39CQ8N584 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC23.84■■□□□ 1.41
TTC39CQ8N584 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
TTC39CQ8N584 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC23.84■■□□□ 1.41
TTC39CQ8N584 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC23.84■■□□□ 1.41
TTC39CQ8N584 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
TTC39CQ8N584 AL353803.4-201ENST00000565882 1934 ntBASIC23.83■■□□□ 1.41
TTC39CQ8N584 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
TTC39CQ8N584 AC009086.3-201ENST00000623486 1008 ntBASIC23.83■■□□□ 1.41
TTC39CQ8N584 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC23.83■■□□□ 1.41
TTC39CQ8N584 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
TTC39CQ8N584 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC23.83■■□□□ 1.4
TTC39CQ8N584 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC23.83■■□□□ 1.4
TTC39CQ8N584 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
TTC39CQ8N584 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
TTC39CQ8N584 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
TTC39CQ8N584 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
TTC39CQ8N584 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
TTC39CQ8N584 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
TTC39CQ8N584 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC23.82■■□□□ 1.4
TTC39CQ8N584 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC23.82■■□□□ 1.4
TTC39CQ8N584 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC23.82■■□□□ 1.4
TTC39CQ8N584 AC099791.2-201ENST00000605725 427 ntBASIC23.82■■□□□ 1.4
TTC39CQ8N584 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
TTC39CQ8N584 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC23.82■■□□□ 1.4
TTC39CQ8N584 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
TTC39CQ8N584 DUSP8P3-201ENST00000399571 1760 ntBASIC23.82■■□□□ 1.4
TTC39CQ8N584 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
TTC39CQ8N584 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
TTC39CQ8N584 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC23.82■■□□□ 1.4
TTC39CQ8N584 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
TTC39CQ8N584 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
TTC39CQ8N584 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
TTC39CQ8N584 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC23.81■■□□□ 1.4
TTC39CQ8N584 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
TTC39CQ8N584 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC23.81■■□□□ 1.4
TTC39CQ8N584 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
TTC39CQ8N584 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC23.81■■□□□ 1.4
TTC39CQ8N584 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TTC39CQ8N584 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC23.81■■□□□ 1.4
TTC39CQ8N584 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
TTC39CQ8N584 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC23.81■■□□□ 1.4
TTC39CQ8N584 DUSP8P5-201ENST00000422884 1815 ntBASIC23.81■■□□□ 1.4
TTC39CQ8N584 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC23.81■■□□□ 1.4
TTC39CQ8N584 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TTC39CQ8N584 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC23.8■■□□□ 1.4
TTC39CQ8N584 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
TTC39CQ8N584 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC23.8■■□□□ 1.4
TTC39CQ8N584 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
TTC39CQ8N584 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
TTC39CQ8N584 AL138724.1-201ENST00000606771 1088 ntBASIC23.8■■□□□ 1.4
TTC39CQ8N584 SF1-220ENST00000626028 704 ntTSL 2 BASIC23.8■■□□□ 1.4
TTC39CQ8N584 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
TTC39CQ8N584 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
TTC39CQ8N584 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
TTC39CQ8N584 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
TTC39CQ8N584 PEMT-206ENST00000435340 960 ntTSL 5 BASIC23.79■■□□□ 1.4
TTC39CQ8N584 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC23.79■■□□□ 1.4
TTC39CQ8N584 AL499627.2-201ENST00000606283 725 ntBASIC23.79■■□□□ 1.4
TTC39CQ8N584 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
TTC39CQ8N584 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC23.78■■□□□ 1.4
TTC39CQ8N584 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
TTC39CQ8N584 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
TTC39CQ8N584 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC23.78■■□□□ 1.4
TTC39CQ8N584 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
TTC39CQ8N584 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC23.78■■□□□ 1.4
TTC39CQ8N584 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC23.78■■□□□ 1.4
TTC39CQ8N584 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC23.77■■□□□ 1.4
TTC39CQ8N584 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC23.77■■□□□ 1.4
TTC39CQ8N584 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TTC39CQ8N584 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
TTC39CQ8N584 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TTC39CQ8N584 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC23.77■■□□□ 1.4
TTC39CQ8N584 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
TTC39CQ8N584 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC23.77■■□□□ 1.4
TTC39CQ8N584 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TTC39CQ8N584 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC23.77■■□□□ 1.4
TTC39CQ8N584 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
TTC39CQ8N584 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TTC39CQ8N584 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
TTC39CQ8N584 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TTC39CQ8N584 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC23.77■■□□□ 1.39
TTC39CQ8N584 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC23.76■■□□□ 1.39
TTC39CQ8N584 RARA-203ENST00000394086 2008 ntTSL 2 BASIC23.76■■□□□ 1.39
TTC39CQ8N584 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC23.76■■□□□ 1.39
TTC39CQ8N584 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC23.76■■□□□ 1.39
TTC39CQ8N584 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
TTC39CQ8N584 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC23.76■■□□□ 1.39
TTC39CQ8N584 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TTC39CQ8N584 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
TTC39CQ8N584 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
TTC39CQ8N584 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TTC39CQ8N584 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TTC39CQ8N584 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
TTC39CQ8N584 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
TTC39CQ8N584 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
TTC39CQ8N584 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC23.75■■□□□ 1.39
TTC39CQ8N584 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC23.75■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms