Protein–RNA interactions for Protein: Q8N4Z0

RAB42, Putative Ras-related protein Rab-42, humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB42Q8N4Z0 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
RAB42Q8N4Z0 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC21.77■■□□□ 1.08
RAB42Q8N4Z0 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC21.77■■□□□ 1.08
RAB42Q8N4Z0 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC21.77■■□□□ 1.08
RAB42Q8N4Z0 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
RAB42Q8N4Z0 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RAB42Q8N4Z0 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RAB42Q8N4Z0 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.07
RAB42Q8N4Z0 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RAB42Q8N4Z0 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
RAB42Q8N4Z0 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
RAB42Q8N4Z0 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RAB42Q8N4Z0 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RAB42Q8N4Z0 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RAB42Q8N4Z0 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RAB42Q8N4Z0 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RAB42Q8N4Z0 AL136116.3-201ENST00000402907 1138 ntBASIC21.76■■□□□ 1.07
RAB42Q8N4Z0 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RAB42Q8N4Z0 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
RAB42Q8N4Z0 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC21.76■■□□□ 1.07
RAB42Q8N4Z0 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC21.76■■□□□ 1.07
RAB42Q8N4Z0 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
RAB42Q8N4Z0 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC21.76■■□□□ 1.07
RAB42Q8N4Z0 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
RAB42Q8N4Z0 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RAB42Q8N4Z0 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
RAB42Q8N4Z0 QDPR-206ENST00000508623 601 ntTSL 3 BASIC21.75■■□□□ 1.07
RAB42Q8N4Z0 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC21.75■■□□□ 1.07
RAB42Q8N4Z0 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
RAB42Q8N4Z0 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RAB42Q8N4Z0 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
RAB42Q8N4Z0 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RAB42Q8N4Z0 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
RAB42Q8N4Z0 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RAB42Q8N4Z0 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RAB42Q8N4Z0 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
RAB42Q8N4Z0 ANOS2P-203ENST00000472227 1816 ntBASIC21.74■■□□□ 1.07
RAB42Q8N4Z0 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC21.74■■□□□ 1.07
RAB42Q8N4Z0 RASSF1-AS1-201ENST00000629828 790 ntBASIC21.74■■□□□ 1.07
RAB42Q8N4Z0 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
RAB42Q8N4Z0 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RAB42Q8N4Z0 LINC01529-204ENST00000636474 1715 ntBASIC21.74■■□□□ 1.07
RAB42Q8N4Z0 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
RAB42Q8N4Z0 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
RAB42Q8N4Z0 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RAB42Q8N4Z0 AC079630.1-202ENST00000618127 1840 ntBASIC21.73■■□□□ 1.07
RAB42Q8N4Z0 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
RAB42Q8N4Z0 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RAB42Q8N4Z0 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC21.73■■□□□ 1.07
RAB42Q8N4Z0 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
RAB42Q8N4Z0 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RAB42Q8N4Z0 DUX4L19-201ENST00000557448 1267 ntBASIC21.73■■□□□ 1.07
RAB42Q8N4Z0 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC21.73■■□□□ 1.07
RAB42Q8N4Z0 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
RAB42Q8N4Z0 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RAB42Q8N4Z0 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
RAB42Q8N4Z0 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RAB42Q8N4Z0 AC092068.2-201ENST00000590491 1708 ntBASIC21.72■■□□□ 1.07
RAB42Q8N4Z0 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC21.72■■□□□ 1.07
RAB42Q8N4Z0 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RAB42Q8N4Z0 MIR4466-201ENST00000606121 54 ntBASIC21.72■■□□□ 1.07
RAB42Q8N4Z0 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC21.72■■□□□ 1.07
RAB42Q8N4Z0 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RAB42Q8N4Z0 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC21.72■■□□□ 1.07
RAB42Q8N4Z0 VGF-203ENST00000611537 1622 ntTSL 5 BASIC21.72■■□□□ 1.07
RAB42Q8N4Z0 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RAB42Q8N4Z0 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RAB42Q8N4Z0 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
RAB42Q8N4Z0 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC21.71■■□□□ 1.07
RAB42Q8N4Z0 AC009086.3-201ENST00000623486 1008 ntBASIC21.71■■□□□ 1.07
RAB42Q8N4Z0 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RAB42Q8N4Z0 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
RAB42Q8N4Z0 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC21.71■■□□□ 1.07
RAB42Q8N4Z0 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.71■■□□□ 1.07
RAB42Q8N4Z0 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
RAB42Q8N4Z0 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
RAB42Q8N4Z0 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC21.7■■□□□ 1.07
RAB42Q8N4Z0 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC21.7■■□□□ 1.07
RAB42Q8N4Z0 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
RAB42Q8N4Z0 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RAB42Q8N4Z0 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
RAB42Q8N4Z0 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC21.7■■□□□ 1.06
RAB42Q8N4Z0 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC21.7■■□□□ 1.06
RAB42Q8N4Z0 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
RAB42Q8N4Z0 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RAB42Q8N4Z0 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RAB42Q8N4Z0 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21.69■■□□□ 1.06
RAB42Q8N4Z0 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RAB42Q8N4Z0 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RAB42Q8N4Z0 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC21.69■■□□□ 1.06
RAB42Q8N4Z0 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RAB42Q8N4Z0 DUX4L4-201ENST00000566884 1269 ntBASIC21.69■■□□□ 1.06
RAB42Q8N4Z0 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC21.69■■□□□ 1.06
RAB42Q8N4Z0 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC21.69■■□□□ 1.06
RAB42Q8N4Z0 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC21.69■■□□□ 1.06
RAB42Q8N4Z0 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RAB42Q8N4Z0 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
RAB42Q8N4Z0 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RAB42Q8N4Z0 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RAB42Q8N4Z0 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms