Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC22.88■■□□□ 1.25
SYNPOQ8N3V7 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC22.88■■□□□ 1.25
SYNPOQ8N3V7 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC22.88■■□□□ 1.25
SYNPOQ8N3V7 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC22.88■■□□□ 1.25
SYNPOQ8N3V7 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC22.88■■□□□ 1.25
SYNPOQ8N3V7 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC22.88■■□□□ 1.25
SYNPOQ8N3V7 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
SYNPOQ8N3V7 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
SYNPOQ8N3V7 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
SYNPOQ8N3V7 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
SYNPOQ8N3V7 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
SYNPOQ8N3V7 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
SYNPOQ8N3V7 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC22.87■■□□□ 1.25
SYNPOQ8N3V7 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
SYNPOQ8N3V7 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC22.87■■□□□ 1.25
SYNPOQ8N3V7 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC22.87■■□□□ 1.25
SYNPOQ8N3V7 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC22.87■■□□□ 1.25
SYNPOQ8N3V7 AC012414.1-201ENST00000556676 535 ntBASIC22.87■■□□□ 1.25
SYNPOQ8N3V7 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC22.87■■□□□ 1.25
SYNPOQ8N3V7 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
SYNPOQ8N3V7 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
SYNPOQ8N3V7 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC22.87■■□□□ 1.25
SYNPOQ8N3V7 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC22.86■■□□□ 1.25
SYNPOQ8N3V7 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC22.86■■□□□ 1.25
SYNPOQ8N3V7 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
SYNPOQ8N3V7 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC22.86■■□□□ 1.25
SYNPOQ8N3V7 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC22.86■■□□□ 1.25
SYNPOQ8N3V7 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
SYNPOQ8N3V7 AC092437.1-201ENST00000624794 1048 ntBASIC22.86■■□□□ 1.25
SYNPOQ8N3V7 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC22.86■■□□□ 1.25
SYNPOQ8N3V7 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
SYNPOQ8N3V7 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
SYNPOQ8N3V7 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
SYNPOQ8N3V7 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC22.85■■□□□ 1.25
SYNPOQ8N3V7 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
SYNPOQ8N3V7 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC22.85■■□□□ 1.25
SYNPOQ8N3V7 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
SYNPOQ8N3V7 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC22.85■■□□□ 1.25
SYNPOQ8N3V7 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC22.85■■□□□ 1.25
SYNPOQ8N3V7 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
SYNPOQ8N3V7 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC22.85■■□□□ 1.25
SYNPOQ8N3V7 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC22.85■■□□□ 1.25
SYNPOQ8N3V7 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC22.85■■□□□ 1.25
SYNPOQ8N3V7 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC22.85■■□□□ 1.25
SYNPOQ8N3V7 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
SYNPOQ8N3V7 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC22.85■■□□□ 1.25
SYNPOQ8N3V7 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
SYNPOQ8N3V7 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC22.84■■□□□ 1.25
SYNPOQ8N3V7 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC22.84■■□□□ 1.25
SYNPOQ8N3V7 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
SYNPOQ8N3V7 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC22.84■■□□□ 1.25
SYNPOQ8N3V7 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
SYNPOQ8N3V7 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC22.84■■□□□ 1.25
SYNPOQ8N3V7 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC22.84■■□□□ 1.25
SYNPOQ8N3V7 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC22.84■■□□□ 1.25
SYNPOQ8N3V7 PKM-204ENST00000449901 2526 ntTSL 2 BASIC22.84■■□□□ 1.25
SYNPOQ8N3V7 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
SYNPOQ8N3V7 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC22.84■■□□□ 1.25
SYNPOQ8N3V7 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
SYNPOQ8N3V7 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC22.83■■□□□ 1.25
SYNPOQ8N3V7 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC22.83■■□□□ 1.25
SYNPOQ8N3V7 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
SYNPOQ8N3V7 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
SYNPOQ8N3V7 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
SYNPOQ8N3V7 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC22.83■■□□□ 1.24
SYNPOQ8N3V7 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC22.83■■□□□ 1.24
SYNPOQ8N3V7 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC22.83■■□□□ 1.24
SYNPOQ8N3V7 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC22.83■■□□□ 1.24
SYNPOQ8N3V7 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
SYNPOQ8N3V7 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC22.82■■□□□ 1.24
SYNPOQ8N3V7 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC22.82■■□□□ 1.24
SYNPOQ8N3V7 HLA-L-211ENST00000482052 1765 ntBASIC22.82■■□□□ 1.24
SYNPOQ8N3V7 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
SYNPOQ8N3V7 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
SYNPOQ8N3V7 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC22.82■■□□□ 1.24
SYNPOQ8N3V7 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC22.82■■□□□ 1.24
SYNPOQ8N3V7 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
SYNPOQ8N3V7 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC22.82■■□□□ 1.24
SYNPOQ8N3V7 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC22.82■■□□□ 1.24
SYNPOQ8N3V7 AL499627.2-201ENST00000606283 725 ntBASIC22.82■■□□□ 1.24
SYNPOQ8N3V7 AC133637.1-201ENST00000624115 1537 ntBASIC22.82■■□□□ 1.24
SYNPOQ8N3V7 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC22.82■■□□□ 1.24
SYNPOQ8N3V7 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
SYNPOQ8N3V7 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
SYNPOQ8N3V7 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC22.81■■□□□ 1.24
SYNPOQ8N3V7 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC22.81■■□□□ 1.24
SYNPOQ8N3V7 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
SYNPOQ8N3V7 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
SYNPOQ8N3V7 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC22.81■■□□□ 1.24
SYNPOQ8N3V7 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
SYNPOQ8N3V7 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
SYNPOQ8N3V7 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
SYNPOQ8N3V7 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC22.8■■□□□ 1.24
SYNPOQ8N3V7 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
SYNPOQ8N3V7 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC22.8■■□□□ 1.24
SYNPOQ8N3V7 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
SYNPOQ8N3V7 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
SYNPOQ8N3V7 CCDC92B-201ENST00000575506 885 ntBASIC22.8■■□□□ 1.24
SYNPOQ8N3V7 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC22.8■■□□□ 1.24
SYNPOQ8N3V7 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms