Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
MRPL55Q7Z7F7 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
MRPL55Q7Z7F7 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC14.33□□□□□ -0.11
MRPL55Q7Z7F7 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
MRPL55Q7Z7F7 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC14.33□□□□□ -0.11
MRPL55Q7Z7F7 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
MRPL55Q7Z7F7 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
MRPL55Q7Z7F7 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC14.33□□□□□ -0.12
MRPL55Q7Z7F7 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC14.33□□□□□ -0.12
MRPL55Q7Z7F7 DUSP8P3-201ENST00000399571 1760 ntBASIC14.33□□□□□ -0.12
MRPL55Q7Z7F7 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
MRPL55Q7Z7F7 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
MRPL55Q7Z7F7 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
MRPL55Q7Z7F7 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC14.33□□□□□ -0.12
MRPL55Q7Z7F7 AL033527.3-201ENST00000566366 1196 ntBASIC14.33□□□□□ -0.12
MRPL55Q7Z7F7 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
MRPL55Q7Z7F7 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC14.33□□□□□ -0.12
MRPL55Q7Z7F7 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
MRPL55Q7Z7F7 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
MRPL55Q7Z7F7 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
MRPL55Q7Z7F7 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
MRPL55Q7Z7F7 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC14.33□□□□□ -0.12
MRPL55Q7Z7F7 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
MRPL55Q7Z7F7 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
MRPL55Q7Z7F7 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
MRPL55Q7Z7F7 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
MRPL55Q7Z7F7 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
MRPL55Q7Z7F7 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
MRPL55Q7Z7F7 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC14.32□□□□□ -0.12
MRPL55Q7Z7F7 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
MRPL55Q7Z7F7 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC14.32□□□□□ -0.12
MRPL55Q7Z7F7 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
MRPL55Q7Z7F7 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
MRPL55Q7Z7F7 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC14.32□□□□□ -0.12
MRPL55Q7Z7F7 AC004448.1-201ENST00000458332 883 ntBASIC14.32□□□□□ -0.12
MRPL55Q7Z7F7 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
MRPL55Q7Z7F7 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
MRPL55Q7Z7F7 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
MRPL55Q7Z7F7 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC14.32□□□□□ -0.12
MRPL55Q7Z7F7 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
MRPL55Q7Z7F7 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
MRPL55Q7Z7F7 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC14.31□□□□□ -0.12
MRPL55Q7Z7F7 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
MRPL55Q7Z7F7 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
MRPL55Q7Z7F7 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
MRPL55Q7Z7F7 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
MRPL55Q7Z7F7 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
MRPL55Q7Z7F7 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
MRPL55Q7Z7F7 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
MRPL55Q7Z7F7 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
MRPL55Q7Z7F7 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC14.31□□□□□ -0.12
MRPL55Q7Z7F7 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
MRPL55Q7Z7F7 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
MRPL55Q7Z7F7 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
MRPL55Q7Z7F7 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
MRPL55Q7Z7F7 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
MRPL55Q7Z7F7 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
MRPL55Q7Z7F7 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
MRPL55Q7Z7F7 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
MRPL55Q7Z7F7 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
MRPL55Q7Z7F7 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
MRPL55Q7Z7F7 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC14.31□□□□□ -0.12
MRPL55Q7Z7F7 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
MRPL55Q7Z7F7 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
MRPL55Q7Z7F7 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
MRPL55Q7Z7F7 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
MRPL55Q7Z7F7 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
MRPL55Q7Z7F7 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
MRPL55Q7Z7F7 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
MRPL55Q7Z7F7 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC14.3□□□□□ -0.12
MRPL55Q7Z7F7 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
MRPL55Q7Z7F7 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC14.3□□□□□ -0.12
MRPL55Q7Z7F7 KRT8P33-201ENST00000508125 1423 ntBASIC14.3□□□□□ -0.12
MRPL55Q7Z7F7 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
MRPL55Q7Z7F7 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
MRPL55Q7Z7F7 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
MRPL55Q7Z7F7 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
MRPL55Q7Z7F7 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
MRPL55Q7Z7F7 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
MRPL55Q7Z7F7 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC14.29□□□□□ -0.12
MRPL55Q7Z7F7 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
MRPL55Q7Z7F7 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
MRPL55Q7Z7F7 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
MRPL55Q7Z7F7 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC14.29□□□□□ -0.12
MRPL55Q7Z7F7 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC14.29□□□□□ -0.12
MRPL55Q7Z7F7 H19-210ENST00000439725 1929 ntTSL 2 BASIC14.29□□□□□ -0.12
MRPL55Q7Z7F7 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
MRPL55Q7Z7F7 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
MRPL55Q7Z7F7 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
MRPL55Q7Z7F7 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
MRPL55Q7Z7F7 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
MRPL55Q7Z7F7 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
MRPL55Q7Z7F7 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
MRPL55Q7Z7F7 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
MRPL55Q7Z7F7 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
MRPL55Q7Z7F7 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC14.28□□□□□ -0.12
MRPL55Q7Z7F7 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
MRPL55Q7Z7F7 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC14.28□□□□□ -0.12
MRPL55Q7Z7F7 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
MRPL55Q7Z7F7 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms