Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC14.65□□□□□ -0.06
SCXQ7RTU7 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SCXQ7RTU7 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
SCXQ7RTU7 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SCXQ7RTU7 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
SCXQ7RTU7 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SCXQ7RTU7 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SCXQ7RTU7 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC14.64□□□□□ -0.07
SCXQ7RTU7 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SCXQ7RTU7 AC004448.1-201ENST00000458332 883 ntBASIC14.64□□□□□ -0.07
SCXQ7RTU7 AC005837.3-201ENST00000612163 286 ntBASIC14.64□□□□□ -0.07
SCXQ7RTU7 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SCXQ7RTU7 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SCXQ7RTU7 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SCXQ7RTU7 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC14.64□□□□□ -0.07
SCXQ7RTU7 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SCXQ7RTU7 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SCXQ7RTU7 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SCXQ7RTU7 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SCXQ7RTU7 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SCXQ7RTU7 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC14.63□□□□□ -0.07
SCXQ7RTU7 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC14.63□□□□□ -0.07
SCXQ7RTU7 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC14.63□□□□□ -0.07
SCXQ7RTU7 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
SCXQ7RTU7 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SCXQ7RTU7 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SCXQ7RTU7 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
SCXQ7RTU7 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SCXQ7RTU7 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
SCXQ7RTU7 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
SCXQ7RTU7 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC14.62□□□□□ -0.07
SCXQ7RTU7 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
SCXQ7RTU7 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC14.62□□□□□ -0.07
SCXQ7RTU7 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
SCXQ7RTU7 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
SCXQ7RTU7 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC14.62□□□□□ -0.07
SCXQ7RTU7 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SCXQ7RTU7 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SCXQ7RTU7 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SCXQ7RTU7 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
SCXQ7RTU7 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
SCXQ7RTU7 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC14.62□□□□□ -0.07
SCXQ7RTU7 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC14.62□□□□□ -0.07
SCXQ7RTU7 SRD5A1P1-201ENST00000442297 786 ntBASIC14.62□□□□□ -0.07
SCXQ7RTU7 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC14.62□□□□□ -0.07
SCXQ7RTU7 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
SCXQ7RTU7 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SCXQ7RTU7 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
SCXQ7RTU7 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
SCXQ7RTU7 AC138932.3-201ENST00000567634 1902 ntBASIC14.62□□□□□ -0.07
SCXQ7RTU7 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SCXQ7RTU7 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC14.62□□□□□ -0.07
SCXQ7RTU7 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
SCXQ7RTU7 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC14.61□□□□□ -0.07
SCXQ7RTU7 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
SCXQ7RTU7 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SCXQ7RTU7 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
SCXQ7RTU7 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SCXQ7RTU7 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC14.61□□□□□ -0.07
SCXQ7RTU7 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC14.61□□□□□ -0.07
SCXQ7RTU7 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SCXQ7RTU7 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
SCXQ7RTU7 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
SCXQ7RTU7 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
SCXQ7RTU7 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SCXQ7RTU7 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
SCXQ7RTU7 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SCXQ7RTU7 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SCXQ7RTU7 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SCXQ7RTU7 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
SCXQ7RTU7 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SCXQ7RTU7 PBX2P1-201ENST00000493219 1291 ntBASIC14.6□□□□□ -0.07
SCXQ7RTU7 AC133561.4-201ENST00000566112 224 ntBASIC14.6□□□□□ -0.07
SCXQ7RTU7 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SCXQ7RTU7 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SCXQ7RTU7 AC005703.6-201ENST00000623265 1329 ntBASIC14.6□□□□□ -0.07
SCXQ7RTU7 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SCXQ7RTU7 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
SCXQ7RTU7 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SCXQ7RTU7 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC14.59□□□□□ -0.07
SCXQ7RTU7 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
SCXQ7RTU7 SLC6A10P-202ENST00000431994 2058 ntBASIC14.59□□□□□ -0.07
SCXQ7RTU7 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC14.59□□□□□ -0.07
SCXQ7RTU7 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
SCXQ7RTU7 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
SCXQ7RTU7 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC14.59□□□□□ -0.07
SCXQ7RTU7 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SCXQ7RTU7 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC14.59□□□□□ -0.07
SCXQ7RTU7 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC14.59□□□□□ -0.07
SCXQ7RTU7 AC106739.1-201ENST00000617035 715 ntBASIC14.59□□□□□ -0.07
SCXQ7RTU7 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
SCXQ7RTU7 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SCXQ7RTU7 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SCXQ7RTU7 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
SCXQ7RTU7 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SCXQ7RTU7 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SCXQ7RTU7 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
SCXQ7RTU7 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
SCXQ7RTU7 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
SCXQ7RTU7 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms