Protein–RNA interactions for Protein: Q7RTT4

SSX8, Protein SSX8, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX8Q7RTT4 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SSX8Q7RTT4 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SSX8Q7RTT4 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SSX8Q7RTT4 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC19.42■□□□□ 0.7
SSX8Q7RTT4 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SSX8Q7RTT4 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC19.42■□□□□ 0.7
SSX8Q7RTT4 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
SSX8Q7RTT4 AC133637.1-201ENST00000624115 1537 ntBASIC19.41■□□□□ 0.7
SSX8Q7RTT4 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SSX8Q7RTT4 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC19.41■□□□□ 0.7
SSX8Q7RTT4 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SSX8Q7RTT4 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SSX8Q7RTT4 MIR935-201ENST00000401179 91 ntBASIC19.41■□□□□ 0.7
SSX8Q7RTT4 LINC01124-201ENST00000409786 2117 ntBASIC19.41■□□□□ 0.7
SSX8Q7RTT4 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SSX8Q7RTT4 AC099791.1-201ENST00000416440 715 ntBASIC19.41■□□□□ 0.7
SSX8Q7RTT4 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SSX8Q7RTT4 AC105265.2-201ENST00000467189 838 ntBASIC19.41■□□□□ 0.7
SSX8Q7RTT4 AC008764.7-201ENST00000593779 1081 ntBASIC19.41■□□□□ 0.7
SSX8Q7RTT4 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
SSX8Q7RTT4 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC19.41■□□□□ 0.7
SSX8Q7RTT4 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SSX8Q7RTT4 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
SSX8Q7RTT4 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SSX8Q7RTT4 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SSX8Q7RTT4 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SSX8Q7RTT4 AL139125.2-201ENST00000623134 1869 ntBASIC19.4■□□□□ 0.7
SSX8Q7RTT4 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC19.4■□□□□ 0.7
SSX8Q7RTT4 OR2I1P-207ENST00000453522 948 ntBASIC19.4■□□□□ 0.7
SSX8Q7RTT4 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC19.4■□□□□ 0.7
SSX8Q7RTT4 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SSX8Q7RTT4 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SSX8Q7RTT4 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SSX8Q7RTT4 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SSX8Q7RTT4 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SSX8Q7RTT4 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SSX8Q7RTT4 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC19.39■□□□□ 0.69
SSX8Q7RTT4 RBM38-205ENST00000440234 686 ntTSL 2 BASIC19.39■□□□□ 0.69
SSX8Q7RTT4 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SSX8Q7RTT4 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC19.39■□□□□ 0.69
SSX8Q7RTT4 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC19.39■□□□□ 0.69
SSX8Q7RTT4 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SSX8Q7RTT4 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SSX8Q7RTT4 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SSX8Q7RTT4 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SSX8Q7RTT4 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC19.38■□□□□ 0.69
SSX8Q7RTT4 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC19.38■□□□□ 0.69
SSX8Q7RTT4 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC19.38■□□□□ 0.69
SSX8Q7RTT4 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SSX8Q7RTT4 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SSX8Q7RTT4 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SSX8Q7RTT4 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC19.37■□□□□ 0.69
SSX8Q7RTT4 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC19.37■□□□□ 0.69
SSX8Q7RTT4 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
SSX8Q7RTT4 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
SSX8Q7RTT4 IRS3P-201ENST00000223076 1006 ntBASIC19.37■□□□□ 0.69
SSX8Q7RTT4 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC19.37■□□□□ 0.69
SSX8Q7RTT4 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC19.37■□□□□ 0.69
SSX8Q7RTT4 LGR4-203ENST00000480977 492 ntTSL 2 BASIC19.37■□□□□ 0.69
SSX8Q7RTT4 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC19.37■□□□□ 0.69
SSX8Q7RTT4 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.37■□□□□ 0.69
SSX8Q7RTT4 AC126544.1-201ENST00000580842 1059 ntBASIC19.37■□□□□ 0.69
SSX8Q7RTT4 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC19.37■□□□□ 0.69
SSX8Q7RTT4 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SSX8Q7RTT4 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SSX8Q7RTT4 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SSX8Q7RTT4 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC19.36■□□□□ 0.69
SSX8Q7RTT4 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SSX8Q7RTT4 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
SSX8Q7RTT4 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC19.36■□□□□ 0.69
SSX8Q7RTT4 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
SSX8Q7RTT4 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC19.36■□□□□ 0.69
SSX8Q7RTT4 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SSX8Q7RTT4 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SSX8Q7RTT4 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SSX8Q7RTT4 GRAMD4P2-201ENST00000423297 1097 ntBASIC19.36■□□□□ 0.69
SSX8Q7RTT4 ZNRF2P3-201ENST00000424200 374 ntBASIC19.36■□□□□ 0.69
SSX8Q7RTT4 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SSX8Q7RTT4 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC19.36■□□□□ 0.69
SSX8Q7RTT4 MAG-206ENST00000597035 542 ntTSL 4 BASIC19.36■□□□□ 0.69
SSX8Q7RTT4 AC068587.7-201ENST00000641602 218 ntBASIC19.36■□□□□ 0.69
SSX8Q7RTT4 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SSX8Q7RTT4 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SSX8Q7RTT4 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC19.35■□□□□ 0.69
SSX8Q7RTT4 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC19.35■□□□□ 0.69
SSX8Q7RTT4 AP005435.1-201ENST00000529293 1178 ntBASIC19.35■□□□□ 0.69
SSX8Q7RTT4 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC19.35■□□□□ 0.69
SSX8Q7RTT4 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC19.35■□□□□ 0.69
SSX8Q7RTT4 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SSX8Q7RTT4 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC19.35■□□□□ 0.69
SSX8Q7RTT4 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
SSX8Q7RTT4 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SSX8Q7RTT4 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC19.35■□□□□ 0.69
SSX8Q7RTT4 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
SSX8Q7RTT4 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
SSX8Q7RTT4 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SSX8Q7RTT4 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC19.34■□□□□ 0.69
SSX8Q7RTT4 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC19.34■□□□□ 0.69
SSX8Q7RTT4 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SSX8Q7RTT4 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 14.1 ms